| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1089 |
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| Symbol | |
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| ID | 4012096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1121214 |
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| End bp | 1123289 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940766 |
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| Product | ribonuclease II |
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| Protein accession | YP_547939 |
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| Protein GI | 91786987 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.554562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTGTAT TGTTTGAAGA GACCGGCAAG TTTCTGGCTG GCCGGATTTT GTCGGAGAGC
GACGCGTCGC TGCAGGTCGA ACTCGACTCC GGCAAACGCG TGAAGGTCAA GGCGGCCAAT
GCGCTGCTGA AGTTTGAAAA GCCCGCCCCC GCCGAGTTGG TGGCCGCCGG GCAAAAATTG
AGTGCCGACA TCGAGCTGGA CCTGGCCTGG GAATTCGCCA GCGACGAGGA ATTCGGCTTT
GCCGACCTGG CGCGCGACTA TTTCAGTTCC GACGCGTCCA GACCCGCCTC CCTCGAGCAG
CAGGCCGCGG CGCTGTTCCG CCTGTTCGAG TCGCCGCATT ATTTCCGGCG GGCGGGCAAG
GGCCGCTTCA AGAAAGCGCC GGCAGAAATC CTGCAGCAGG CATTGGTCGC CATCGAAAAG
AAAAAGCAGC TCGCCGCGCA GATTACCGCG TGGGCAGAAG AACTCGCGCA AGGGCAATGC
CCCGGCCCGG TGCGCGAGCA GCTCTACAAA ATCCTGTTCA AGCCCGACAA GAACAGCGCC
GAATACAAGG CCGTGGTCGA GGCTTCACGC AGCACGCACA TCGCACCGCT GGATCTGCTG
CAAAAAGCCG GCGCCATTGC CTCGCCCTAC CAGTTTCACT GGAAGCGCTT TTTGTTTGAG
AACTTCCCCA AGGGGACGGC CTTCCCGGCC CTGCAGGCAC CCGAGATCAA GGACGATCTG
CCGCTGGCGG ACGTGAAAGC GTTTTCCATC GACGATTCCG CCACCACCGA GATCGACGAT
GCCCTGTCGG TGCAGGGCCT GGGCAGCGGC ACCGTCACGC TGGGTATTCA CATTGCAGCA
CCCGGCCTGG CCGTGCTGCC TGGCAGCGCG ATCGATGCAG TGGGCCGCGC GCGGCTGTCC
ACCGTGTATA TGCCGGGCTA CAAGCTGACC ATGCTGCCCG ACGATATCGT CAAGACCTAT
ACGCTGCTGG AGGGCCGCAA CTGCCCCGCG CTGTCGCTCT ACCTCACGCT GGACGAGGCC
ACCTTCGAGA TCAAGGCAAG TGCCACACGG CTGGAACAGG TGCCCATCGT CAGCAACCTG
CGGCACGACA AGCTGGACAG CGTCTTCACC GAGGCATTTT TTGAAGCGGC CCAGGCCAGC
CCGCCGGTGG ATGTCCAGTG GGGCGTGGAG CTGTCCTTTC TGCACCGCCT GGCCAGACAC
CTGAAGGCCC AGCGCGAAGT GGTGCGCGGC AAGCCTGAGA ACTTCAACCG GCCCGACTAC
AACTTCCGGC TCGACAACCC GTCCGGCCAG GAGCCGCAGG GCGATGAGAC CGTCAGCATC
AGCACACGCC AACGTGGCGC CCCGCTCGAC CTGATCGTGG CCGAAGCCAT GATCCTGGCC
AACAGCACCT GGGGCCAGTG GCTGGCCGAG CACGGCGTGC CCGGCATTTA CCGCAGCCAG
GCCAGCCTGG CGCCCGGCGT GAAGGTGCGC ATGGGCACCA AGGCCCTGCC GCACGCAGGG
ATTGGCGTCA AGAGCTACGC CTGGAGCACT TCGCCGCTGC GCCGCTACAC CGACCTGGTC
AACCAGTGGC AAATCATTGC CTGCGCACGG CACGGCCGAA CGGCGGCCCT GGCGGCCCCC
TTCAAGCCCA AGGACGCGGA ACTCTTTTCC ATCATTTCGG GTTTTGACGC CGCCTACAGC
GCCTACAACG GCTTTCAGGC CGGCATTGAG CGCTACTGGA CGCTGAAGTA CCTGGAACAA
AACGGCATCA CCGAGCTGAC GGCCACCGCC TTCAAGGACA ACCTGATTCG CGCCGACGAC
CTGCCGCTGG TGCTGCCTGC GCTGGGCGCG CAGGGCCTGC CGCGCGGTGC CAAAGTGCGG
GTGAAGCTCG GTGCGATTGA CGAGATCACC CTGGATATCT CGGGCGCGGT GACGGAGCGA
CTGGATGCCG TGGCCGAGGA ATCCGCCGAG GCGATGGAGA TGGAACTGGA AGAAGAGGAC
GCGGAGGCCG ACCTGGCAGC CGGCCCGATC TCGATTGCAG TCGATGTCAA CGAGCCGGCA
GCCGATAGCG CGCCCGCACT CGCAGCGGCT GATTGA
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| Protein sequence | MFVLFEETGK FLAGRILSES DASLQVELDS GKRVKVKAAN ALLKFEKPAP AELVAAGQKL
SADIELDLAW EFASDEEFGF ADLARDYFSS DASRPASLEQ QAAALFRLFE SPHYFRRAGK
GRFKKAPAEI LQQALVAIEK KKQLAAQITA WAEELAQGQC PGPVREQLYK ILFKPDKNSA
EYKAVVEASR STHIAPLDLL QKAGAIASPY QFHWKRFLFE NFPKGTAFPA LQAPEIKDDL
PLADVKAFSI DDSATTEIDD ALSVQGLGSG TVTLGIHIAA PGLAVLPGSA IDAVGRARLS
TVYMPGYKLT MLPDDIVKTY TLLEGRNCPA LSLYLTLDEA TFEIKASATR LEQVPIVSNL
RHDKLDSVFT EAFFEAAQAS PPVDVQWGVE LSFLHRLARH LKAQREVVRG KPENFNRPDY
NFRLDNPSGQ EPQGDETVSI STRQRGAPLD LIVAEAMILA NSTWGQWLAE HGVPGIYRSQ
ASLAPGVKVR MGTKALPHAG IGVKSYAWST SPLRRYTDLV NQWQIIACAR HGRTAALAAP
FKPKDAELFS IISGFDAAYS AYNGFQAGIE RYWTLKYLEQ NGITELTATA FKDNLIRADD
LPLVLPALGA QGLPRGAKVR VKLGAIDEIT LDISGAVTER LDAVAEESAE AMEMELEEED
AEADLAAGPI SIAVDVNEPA ADSAPALAAA D
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