| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1021 |
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| Symbol | |
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| ID | 4012142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1046913 |
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| End bp | 1048247 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637940699 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_547872 |
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| Protein GI | 91786920 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.458838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA AGAGCGGCAC CCACTCAGCT GAACATGCCA TGTTCAGCAC GGCAGCCATT
GCAATGCGGC AACAACCACC TGCCAGAGTG GCACGCATGG TCACCCTGGC CATCTGCGTC
ATGGCCGCCG CCGCACTGGC CTACGCCAGC CTGGCATCGA TGGATATTGT GGTCACGGCA
CAGGGGCGCG TCAGTGCCTC GGGCAAGAGC AAGGTCATCC AGCCGCTGGA AGCAGGAGTC
GTCAAGGCCA TTGCGGTCAG GGACGGCCAG TCCGTCAAAG CTGGCGACTT GCTCCTGGAG
CTCGACGCCA CCGCCACCCT GGCCGATCGT GACCGGCTCC AGCGTGAATT TTGGGAAACC
CAGGCGGACG TGTTACGGCT TAACGCCTTG CTATCGGGCA AGGTGGCTTG GGCGGAAGCG
CGCGATTTGC CGGTCGCGAT GGTTGCCAAT CAGCAGGCGG TGCTGGCCAG CCGGCGCAGT
GAGCAGGATG CCCGTGTAGC GGCGCTGGAC GCCGATATTG CGCGACGTAC AGCCGATCAT
GAGGCCATCT CGGCCAATAT CGCCCAGTTG CACAACAGCC TGCCGCTGGT GCGCAAGAAG
CACGAAATGC GCGAGGAACT GGCCACCACG GGCCATATCG CGCAGACGGG GCTGATCGAA
ACCCGGCTTG AACTGCTGGG CATGGAAAAA GACCTCTCCG TCATGGGCAA GCGGCTCAAT
GAATCTGCGG CAAGCCTTCA TGCTTCTGTC CAGCAGCGAA AACAGGCGCA GGCCGAGTTT
CGTGCCCGGG CCAGTGCCGA ACTGGTGGAC GCCATCCGCA AGCATGATGC AGCGCGCCAG
GAGCTGACCA AGGCCACCCA GCGTCGCGAC TTGCAAACCC TGCGCAGCCC GATTGACGGC
GTGGTACAGC AACTGGCAGT CACCACGGTC GGCGGTGTGG TTACTCAAGC GCAGGCACTG
ATGACCATCG TGCCACATCA CGCGGCCCTG GAAGTTGATG CCCAGATCAA TAATCGCGAT
ATCGGTCATG TCAAGGTCGG CCAGCGCGTG ATCAACAAGG TGGAGACCTT CGATTTCACC
CGTTTCGGAT ACATCGAAGG CATGGTGCAG TGGGTGGGCA CCGATGCCGT GATTGATCCC
AAGCTCGGAC CTGTCTACCC GGTGCGTATC AAGTTGAATT CGGTTGAGAC ACCGAACGTT
GTGAACGGTT TGCACGGAGC CGTCACGGCC GGCATGAGTG TGAGCTCGGA TATCCGCACG
GGTGAGCGCC GCATGATCGA ATACTTCATC GCACCCATGC TGCGCTACCA GCAGGAGGCC
TTGCGTGAAA GATAA
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| Protein sequence | MKNKSGTHSA EHAMFSTAAI AMRQQPPARV ARMVTLAICV MAAAALAYAS LASMDIVVTA
QGRVSASGKS KVIQPLEAGV VKAIAVRDGQ SVKAGDLLLE LDATATLADR DRLQREFWET
QADVLRLNAL LSGKVAWAEA RDLPVAMVAN QQAVLASRRS EQDARVAALD ADIARRTADH
EAISANIAQL HNSLPLVRKK HEMREELATT GHIAQTGLIE TRLELLGMEK DLSVMGKRLN
ESAASLHASV QQRKQAQAEF RARASAELVD AIRKHDAARQ ELTKATQRRD LQTLRSPIDG
VVQQLAVTTV GGVVTQAQAL MTIVPHHAAL EVDAQINNRD IGHVKVGQRV INKVETFDFT
RFGYIEGMVQ WVGTDAVIDP KLGPVYPVRI KLNSVETPNV VNGLHGAVTA GMSVSSDIRT
GERRMIEYFI APMLRYQQEA LRER
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