| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1008 |
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| Symbol | |
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| ID | 4012381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1023250 |
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| End bp | 1024134 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940687 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_547860 |
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| Protein GI | 91786908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.547475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.001025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGCG ACAAACGCAC CGCCGGCTTC TGGTTCCTGG CCGCTTTTTT CGCCCTGTTC
GTGCTGTTCC TCTACGGGCC CATGTTCGTC ATCGTGGTGC TGAGCTTTCA GGGCCCCGAA
GGCGGGCTCA CCTTTCCGCT GCGCGGCGTG TCGCTGCACT GGTTTTACAA GCTGGCCGAG
GGGCTGGGCG TGGTGGACAT CGGCACGGCA CTCAGGCGCT CGTTGGGCCT GGGCCTGGCG
GTGATGGCTT TTACCGTCGT GCTGTCGGTG CTGGCCGGCC TGGCTTTCCG CAAGAAGCTC
GCGGGCGCCA ACACGCTGTT TTTTGTGGTG GTGGCGAGCC TGATCATGCC GTCCATCATT
GTGTCGCTGG GCATTGGCCT GGAGTTCCGG CTGCTCGACA CCGGCATCAA GAAGGTGCTT
GAAGTTTTCG GCATGACCGG CACGCTGGAA GGCTACGGCA CCGCACTCGG GCTGTTCACG
TCGGCGCTTG GCGCGCACCT GACCTGGACG CTGCCCTTTG GCCTCCTGAT CATGTTTGCC
GTTTTCAACC GCTTCAACCC CGCCTATGAA GAAGCCGCGC GCGACCTGGG CGCCACGCCG
TGGCAGGGCT TTCGCCATGT GGTGCTGCCG CTGATTGCGC CGTCGGTGGT GGGCATAGGC
ATGTTTGGCT TTACCCTGAG CTGGGATGAA ATCGCCCGCA CCTCGCAGGC CATTGGTGAT
GTGAACACCC TGCCGCTGGA ACTGCAGGGC CTGACCACCA CCGTCACCAC GCCGTCCATC
TACGCGCTGG GCACCGTCAC CACCGTGGTG TCGCTGCTCG TCATGGCGTT GGCCCTGGGC
CTGGCCTGGT GGCTGGACCG GCGGCAAAAG AAAGGCACCC GATGA
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| Protein sequence | MNSDKRTAGF WFLAAFFALF VLFLYGPMFV IVVLSFQGPE GGLTFPLRGV SLHWFYKLAE
GLGVVDIGTA LRRSLGLGLA VMAFTVVLSV LAGLAFRKKL AGANTLFFVV VASLIMPSII
VSLGIGLEFR LLDTGIKKVL EVFGMTGTLE GYGTALGLFT SALGAHLTWT LPFGLLIMFA
VFNRFNPAYE EAARDLGATP WQGFRHVVLP LIAPSVVGIG MFGFTLSWDE IARTSQAIGD
VNTLPLELQG LTTTVTTPSI YALGTVTTVV SLLVMALALG LAWWLDRRQK KGTR
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