| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0923 |
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| Symbol | |
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| ID | 4011038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 940344 |
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| End bp | 942173 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940603 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_547777 |
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| Protein GI | 91786825 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.62016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCTG GAAGTAAGCA ATTGCGTCGC CTATTGTGTT CATCGCTCGT GTTTCTCCCG
CGGCTGGCTT CCTGCCTGGC AGGCCTGCTG CTGGTTCACG GGCAGGTTTT TGCGCAGGAG
GCTGCGAGCC TTCAAGCGGT GGAGCCGCGC CCCGTCCACG CGCAAATCGC CGTCGCAGGC
ACCTCAGGCT TCCAGAAAGA AGCGTCGATG CTGCTCGACA CGTCGGGCGA TCTCACGGTA
GACCAGGTTC ATGCGCGGTT TGAGGCGGGT GAGGGCCAGC CCGTCAGCGC GGGGCAGATC
ATGCCTGCCG GTGGTGGCCG CACGCTCTGG TACCAGCTCA AACTGAGCTC TGTAGCCATA
CCCGCGCGGC TCGTGCTGGC GGTGCCGTAT CCCGGCATGG ACAACGTGGA GCTTTACCGC
CTGGCACCGC AGGCGGGGGG CGAGGGCGAG TGGCAGCTGC AACGTTCGGG CGACCAGATC
CCGGTCATGG CCTGGCCATT GCGGCACTTG TATCCGGCCT TCGAACTGCA GGTTCTGCCG
GGTGAAAACC GGCCCACCTA CCTGCGCATT GCCCACAACC ACCCCATCCT TGTTTACTGG
ACCTTGTCGG ACGCGCGCAG TTTTCAGGAG CGCAGCGAGC ACTGGCATCT GCTGCTGGGC
ATCTATATCG GGCTGGTGCT CCTGATTGTC GTGATGAGCG CCTTTCATGC TGTGTCCTGG
CGCGATTCGA TCCATCTCTT TTACGCAGGG TATGTGCTCG TGGTCGCAGT TGGCCAGCTG
GCCCTGACAG GCCTGGGCGG AGAGTATTTC TGGCCAGGTT CGGCATGGTG GAACGATCGT
GCGCCGGTGG CGTTGACCTT GCTGGGTGCG GCTTTTCTGC ATCTGTTGCT GCGCCAGCTC
GTGGTCGAGC GGGATGTGCC GTCCTGGCTG TCCCGTTGGC TGCTGACCAT GTCGGCGCTC
GGTGCGATGC TCGCGCTGGG CTTTGTGGTG GCTGAGAACA AGCCGTATTT TGTCTTCCCC
TTGCCTTACT ACCTGGTCAG CATGGCCGTT TACCTGGGCG TGGCGGGCTG GTATGCGCGG
CGCAGGCCCC GAGTGGGTCT GTGGGTGCTG GCTGCCATGA TCTGCCTGGC GGGCGGGTCC
ATCTTCCCGT TGCTCCTCAG GCTCGGCCTC TTGCCCCTGA GCGTGGCCGC CCAGTATGGC
GCGCAGATTG GCGCAGCCCT TGAAATCCTG CTGCTGCTGA TTGGCCTGTA TTTCCGCAGC
AACGAGCGGC GCGACACCCA TGCGCGCGTC GGAGCACTCG GCCGCGTGGA TCCACTGACC
GGCGTTGCCA GTCATCGGGT CCTGCTGCGG CGCCTGGAGC AGCTGATTCT TCGCCAGGAG
CGCCACCCGG GTGCGGGTGC GGTCCTGCGC ATCCGGGTCG GCAATGCCAT TGACATCCGC
CAGGAGTACG GGATGGAAGC TGCGCAGGGC GCGGTGGTAC ATGCCGGCGC CTGCGTCACC
GCAGTGGCCC AGGAAGGCGA TACCGTGGCA CGGCATCGCG ATGGCGATTT CGTGCTGATC
CTGCAGGGCA ATGTCACGCG CGAGCAACTG ACCGCGCTCG GACAGCGCCT GATCGCCCGG
GGGCTGACCG AGAGCCCCAG TCTGCCGCCC AGGACGGTGC TGCGGCTCAA GGTGGCGGTG
GCGCAGGCGC CCTTCAAGAC GAAAGACCCC GCGCAGCTGC TTCAGTCACT GGGGGCTGTG
CTGGCCGAGC TTGCAGGGCA CGCCGGCACG GCACTGCGGT TTGTCAGCGC GCCGGATGCC
CCGCACGCTG CGATGAAGCA CAAACCCTAG
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| Protein sequence | MLSGSKQLRR LLCSSLVFLP RLASCLAGLL LVHGQVFAQE AASLQAVEPR PVHAQIAVAG
TSGFQKEASM LLDTSGDLTV DQVHARFEAG EGQPVSAGQI MPAGGGRTLW YQLKLSSVAI
PARLVLAVPY PGMDNVELYR LAPQAGGEGE WQLQRSGDQI PVMAWPLRHL YPAFELQVLP
GENRPTYLRI AHNHPILVYW TLSDARSFQE RSEHWHLLLG IYIGLVLLIV VMSAFHAVSW
RDSIHLFYAG YVLVVAVGQL ALTGLGGEYF WPGSAWWNDR APVALTLLGA AFLHLLLRQL
VVERDVPSWL SRWLLTMSAL GAMLALGFVV AENKPYFVFP LPYYLVSMAV YLGVAGWYAR
RRPRVGLWVL AAMICLAGGS IFPLLLRLGL LPLSVAAQYG AQIGAALEIL LLLIGLYFRS
NERRDTHARV GALGRVDPLT GVASHRVLLR RLEQLILRQE RHPGAGAVLR IRVGNAIDIR
QEYGMEAAQG AVVHAGACVT AVAQEGDTVA RHRDGDFVLI LQGNVTREQL TALGQRLIAR
GLTESPSLPP RTVLRLKVAV AQAPFKTKDP AQLLQSLGAV LAELAGHAGT ALRFVSAPDA
PHAAMKHKP
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