| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0665 |
|---|
| Symbol | |
|---|
| ID | 4011125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 677981 |
|---|
| End bp | 678496 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637940346 |
|---|
| Product | TfoX-like |
|---|
| Protein accession | YP_547522 |
|---|
| Protein GI | 91786570 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3070] Regulator of competence-specific genes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.917152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.475374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTC CCAAAGACGA TTTTGCAATC TACTGCTGTG AACTGCTGTC CGGCGTCGGG
CCGTGCGTTG CCAGGCGCAT GTTTGGCGGC TACGGCATCA GCACCTCAGG CCTGACGCTG
GCGCTGGTGG CCGATCTCGG GGGCGGGGAA AAGCTCTGGC TCAAGGCCGA TGCAGATACC
CGCGGCCGGT TTGAAGCCGC GGGCTGTGAA CGGTTTACCT ATGACATCAC CCGAAACGGC
GAGCGCTTGG CGCACAGCCT GAATTATTAC AGCGCCCCCG AGGAGGCGAT GGAGTCCGCT
CAGTTGATGC TGCAGTGGGC GCGGGTGTCT CTCGATTGCG CGTTGAAAGC GCGTTCTGCC
AAATCACCGC GGGCCCGGGT CGCCAGAAAA ACCACCGCAA AACCGGTCAG CGCAACCTCG
ACCGCCGCCG CCACACCGCC GGCCAGGCCA CGGGCCAGCC GGCCCACCGC ACCGCCCACC
AGGCCGAGCG CCAGGCGCAA GTCAAGCAGG GGCTGA
|
|---|
| Protein sequence | MATPKDDFAI YCCELLSGVG PCVARRMFGG YGISTSGLTL ALVADLGGGE KLWLKADADT
RGRFEAAGCE RFTYDITRNG ERLAHSLNYY SAPEEAMESA QLMLQWARVS LDCALKARSA
KSPRARVARK TTAKPVSATS TAAATPPARP RASRPTAPPT RPSARRKSSR G
|
|---|
| |