| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0652 |
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| Symbol | |
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| ID | 4011229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 661450 |
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| End bp | 663573 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637940333 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_547509 |
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| Protein GI | 91786557 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATACA AAAAAAATTT CAACGCCGCG TTCTTTGCTG CGGCGTATGC CACCCTCTCG
CTCAGTTTGC TGGTCCCCGC CGCCGCCCAA AACACCTCCT CAAACGGCAA CGGCAGCAAT
GGCGACAACC TGATTCTCGA AATGAACAAG GCCTTCAGGC GCAGCGACAA GGGCCGGCTG
GCCCAGATGC TGCCCCAGGC CAGAGGCCAT GCGCTGGAGC CCTGGGCGGC CTACTGGGAG
CTGAAAACGC GTCTGGGCGA GGCCAGCGCG CAGGAGGTGC AGGACTTTCT CGCCCGCTAC
GCCGGCACCT ACCAGGAAGA CCGCCTGCGC AATGACTGGC TGCTGCTGCT GGGCCAGCGC
CGCGACTGGG CCGCCTTTGC GGCCGAGTAC CCGAACTACC GCATGAACGA CGACAGGGAA
GTGCGTTGCT ATGCCCTGCT GGTGGAGCAC CTGAAGAATC CGGCGCTCGA TGCGCGCCTG
TCGGACGAAG TGCGAAAAAA CTGGTACGCG CAGCGCGACG CCGACGACGG CTGCACCGCC
GCCGCCGACC GGCTGGTCGG CGCCCAAAAC CTCACGACGC AGGATGTCTG GCAAAAAGCC
CGCATCGCCA CCGAGGCCAA CCGGCCACGG GCCGCAGCGG GTGCGGTGCA GATCATTGCT
CCGGAGGCCA TGGACCTGCT GACCGAGCTG AACAGCAGCC CCATCAGGTT TCTTGCCGGC
AAACACTTGG CCCTGCGGAA AGTGCGCAAG GAAATCATCA CGCTGGCACT GATCAAGATG
GCCACCACCG ACGTGGAAGG TGCCGCTTTC CAGCTGGAAA GCAAGTGGGC CGTCCAGCTC
AACGCCGAGG AGCGCAACTG GGTCTGGGGC GTGATCGGCA AACAGGCGGC AACCCGCCTG
GGCACGGTGC CGGGCAGCGA TGCGCTGCAG TACTTTGCCA GGGTCAACAA CGACAGCGAC
CTGACGGATG ACATGCTGGC CTGGAAGGCC CGTGCAGCGC TGCGCGCGGG CACCCAGGCC
CAATGGCCGC AGGTGCTGGC GGCCATCAAC GCAATGAGCG AGGAGGCCCG CAAGGACCCG
GCCTGGAGCT ACTGGAAGGC GCGCGCGCTG CTGGCCACGG CGCCGCCCAA CATTCCCACC
GCGGTCAGCA CGCCACAGGG TGTCACGCAG ACCATCAGCA TCGCGCCCCA GCGCGCCGAG
GCGCTGGCGA TGCTGCAGGC TCTGGCCTCC CCGCGCGGCT TTTATGAGCA GCTGGCACTG
GAGGAACTGG GCCAGAAGAT CACGGTGCCG GCCCAGCCGG CGCCACTCAC GGCGGCAGAA
AAGGAAGCCG CACGGCTCAA CCCCGGGCTG AACCGCGCCG CCTATGCCAT CACGATAGGT
TTGCGGCCGG AGGGCGTGCG CGAATGGAAC TACAGCACCA ACCTGCACAA GCGCAACGGC
GAGGGCGAAC GCGCCGGGAT GGGCGACCGC GAACTGCTGG CAGCCGCCCA GTTTGCCTGT
GACCGGCAGA TCTGGGACCG CTGCATCAAC ACCAGCGAGC GCACCAGAAC CGAGACCGAT
TTCGATCAGC GCTTCCCCGT GCCGTTCCGC GAGGCCGTGG TCAAGCGCAG CCGCGAAGTC
GGCCTCGACC CGGCCTACGT TTATGGGCTG ATCCGCCAGG AAAGCCGTTT CATCATGGAT
GCCCGTTCCG GCCCGGGGGC CTCGGGCCTG ATGCAGATCA TGCCCGCCAC GGCGCGCGAA
ACCGCACGCC GAATCGGCCT GGCGGGTTTC ACGCCCGACC AGATCAATGA CCGCGACACC
AACATCACGA TAGGCACCGG CTACCTGAAG CTCGCCCTGG ACGCCTTCGA GGGCTCGATG
GCCATGGCTG CAGCCGCCTA CAACGCCGGG CCGGGCCGGC CCCGCGTCTG GCGCGGGCAA
CCCGGCAGCC CGGTGCTCGA TGCCGCCATC TGGGCCGAGA ATGTGCCCTT CGGCGAGACC
CGCGACTATG TCAAGAAAGT GCTTTCAAAC ACCACCAACT ACGCGGCCAT CCTGACGGGG
CAGCCACAGT CCCTGAAAGC GCGGCTGGGC ATGGTCGGGC CACGCGATGC GTCGCTGCCC
GAGGTGAACA AGGATTTGCC CTGA
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| Protein sequence | MLYKKNFNAA FFAAAYATLS LSLLVPAAAQ NTSSNGNGSN GDNLILEMNK AFRRSDKGRL
AQMLPQARGH ALEPWAAYWE LKTRLGEASA QEVQDFLARY AGTYQEDRLR NDWLLLLGQR
RDWAAFAAEY PNYRMNDDRE VRCYALLVEH LKNPALDARL SDEVRKNWYA QRDADDGCTA
AADRLVGAQN LTTQDVWQKA RIATEANRPR AAAGAVQIIA PEAMDLLTEL NSSPIRFLAG
KHLALRKVRK EIITLALIKM ATTDVEGAAF QLESKWAVQL NAEERNWVWG VIGKQAATRL
GTVPGSDALQ YFARVNNDSD LTDDMLAWKA RAALRAGTQA QWPQVLAAIN AMSEEARKDP
AWSYWKARAL LATAPPNIPT AVSTPQGVTQ TISIAPQRAE ALAMLQALAS PRGFYEQLAL
EELGQKITVP AQPAPLTAAE KEAARLNPGL NRAAYAITIG LRPEGVREWN YSTNLHKRNG
EGERAGMGDR ELLAAAQFAC DRQIWDRCIN TSERTRTETD FDQRFPVPFR EAVVKRSREV
GLDPAYVYGL IRQESRFIMD ARSGPGASGL MQIMPATARE TARRIGLAGF TPDQINDRDT
NITIGTGYLK LALDAFEGSM AMAAAAYNAG PGRPRVWRGQ PGSPVLDAAI WAENVPFGET
RDYVKKVLSN TTNYAAILTG QPQSLKARLG MVGPRDASLP EVNKDLP
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