| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0480 |
|---|
| Symbol | |
|---|
| ID | 4011503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 496734 |
|---|
| End bp | 497624 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637940165 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_547342 |
|---|
| Protein GI | 91786390 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0207202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA CAACCAAACC CGTGAACCAG AAGGCCTGGC TGCTGGTGTT GCCCGTCATC
ATCTGCGTGG CGTTCTCCGC GATTTTGCCG CTCATGACGG TGGTGAATTA TTCGGTGCAG
GACATCATCT CGCCGGAGCG GCGCGTGTTT GTCGGCACCG AGTGGTTTGC CGCGGTGATG
CGCGACGAAG ACTTGCATGC AGCACTGTGG CGGCAACTGA CTTTTTCACT GGCCGTGCTG
GCCGTGGAGA TTCCGCTGGG CATTGCGCTG GCGCTGTCGA TGCCGGCGCA GGGCTGGAAA
GCCTCCCTGG TGCTGGTGCT GGTCGCCCTG TCGCTGCTCA TCCCGTGGAA TGTGGTGGGC
ACGATCTGGC AAATCTATGG CCGGGCCGAC ATCGGCTTGC TGGGCGCGAT GCTGCAGAAG
ATGGGCTTTG ACTACAGTTA TACCGGCAAC GCCAGCCATG CCTGGGCGAC GGTGCTGATG
ATGGATGTAT GGCACTGGAC GCCGTTGGTG GCCTTGCTGT GTTACGCCGG TCTGCGCTCC
ATTCCCGATG CGTACTACCA GGCGGCGCGC ATCGACGGCG CCAGCAAATT CGCCGTGTTC
CGTTACATCC AGCTGCCAAA AATGCGCGGG GTGCTGATGA TCGCCGTGCT GCTGCGCTTC
ATGGACAGCT TCATGATTTA CACCGAGCCC TTTGTGCTGA CGGGCGGCGG GCCAGGCAAT
TCAACGACCT TCCTGTCGCA GTACCTCACG CAAAAGGCCG TCGGGCAGTT TGACCTCGGT
CCCGCAGCGG CCTTCTCGTT GATTTACTTT TTGATCATCC TGCTGCTGTG CTTCATCTTG
TACAACTGGA TGAAGCGCGT GGGTACCCAA GAGAAAGAAG GTGAACAATG A
|
|---|
| Protein sequence | MSTTTKPVNQ KAWLLVLPVI ICVAFSAILP LMTVVNYSVQ DIISPERRVF VGTEWFAAVM
RDEDLHAALW RQLTFSLAVL AVEIPLGIAL ALSMPAQGWK ASLVLVLVAL SLLIPWNVVG
TIWQIYGRAD IGLLGAMLQK MGFDYSYTGN ASHAWATVLM MDVWHWTPLV ALLCYAGLRS
IPDAYYQAAR IDGASKFAVF RYIQLPKMRG VLMIAVLLRF MDSFMIYTEP FVLTGGGPGN
STTFLSQYLT QKAVGQFDLG PAAAFSLIYF LIILLLCFIL YNWMKRVGTQ EKEGEQ
|
|---|
| |