| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0457 |
|---|
| Symbol | |
|---|
| ID | 4011519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 471684 |
|---|
| End bp | 473645 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637940142 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_547319 |
|---|
| Protein GI | 91786367 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.409377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTG ATACCAGCGC CCTGGTAGCC CCGCCGGCCG CCCACGAGCA CCCGAACCAG
TTCGCGCTGC TCAAGCAGCG CCGCTTCGCG CCTTTTTTCT GGACGCAGTT TTCGGGGGCG
GCCAACGACA ACCTGTTCAA GTTCGCCTTC ACCGTGATGG TGACCTACCA GCTCAGTGTG
AGCTGGCTGC CGCCGGCACT GGCGGGGCTG GTGATCGGGG CGCTGTTCAT CCTGCCTTTC
CTGCTGTTTT CGGCCACCAG CGGGCAACTC ACCGACAAGT TCGAAAAAAC CCGCGTGATC
CGCTTCGTCA AGAACCTGGA AGTGGTGATC ATGCTGATCG CGGCGGCCGG GTTCATGAGC
AACAACGCCA ACGTCCAGGT GCCCGTGCTG TTGGGCTGCA CGTTCCTGAT GGGGCTGCAT
TCGACAATCT TCGGCCCGGT CAAGTTCGCC TACCTGCCGC AGGCGCTCAA TGAGCGCGAG
CTGACCGGCG GCAACGGCAT GGTCGAGATG GGGACTTTTG TGGCCATCTT GCTGGGCCAG
GTCGTGGGCG GCCTGATGGT GGCCGTGCCC CAGGTCGGGC CGGACTATGT GGCCATCGCC
TGCGTGTTGC TCGCCCTGGT CGGCCGGGCT GTCTCGCAGT TCATTCCGCT CACGCCAGCG
ACAGACCCGG GCCTCAGGAT CAACTGGAAC CCCGTGACGG AAACCTGGCG CAACCTCAGG
CTCGCCCGCG ACAACGTGGT GGTGTTCCGC TCCATGCTGG GGATCAGCTG GATGTGGTTC
TTTGGCGCGG TGTTTTTGAG CCAGTTCCCG AGTTTTGCCA AAGAGGTGCT GCACGGCAAC
GAGCAGGTGG CGTCTTTGCT GCTGGTCGTG TTCTCCATCG GTATTGCCAC CGGGTCGCTG
TTGTGCGAAG TGCTCAGCAA GCGACACGTT GAAATAGGAC TGGTGCCGGT GGGCGCCATC
GGCATGAGCG TGTTTGCGGT GGATCTCTAC TTCGCATCGC GCGGCCTGCC TCCGGCGCCC
GTCATGAGCG TGGGCGCGTT CATGCTGCAT CAGGCGCACT GGCGCGTCAT GATCGACCTG
GCGCTGCTGA GCCTTTTCGC TGGCCTGTAC AGCGTGCCCA TGTATGCCTT GATCCAGCTG
CGCAGCCCAC CCACCCACCG GGCCCGCATC ATCGCGGCCA ACAACATCCT CAATGCGCTG
TTCATGATCG TCAGCGCCAT CCTGGCTGGC GCGCTGCTCA AGTCCGGATT CAGCATTCCG
CAGATCTTCC TGCTTGTGGG GCTGGCCAAT GCGGTGGTGG GGTTCTATAT CTTCCTGCTG
GTGCCGGAAT ATCTGTTGCG CTTTATCGCG CTGGTCGCGT CGCGCCTGGT CTACCGCTTC
AAGATACAGG GCGATGACAA CATCCCGGCG CAGGGCGCTG CCGTGCTGAC CTGCAACCAC
GTCAGCTTCG TCGACCCGGT GCTGCTGATG GCTGCCAGCC CGCGGCCGAT TTATTTCCTG
ATGGACCACC GCATTTTCAA AATGCCGGTG CTGGGCTGGC TGTTCCGGCT GGCCAAGGCG
ATTCCGATTG CGCCGCGCGC GGAAGATCCG GTGGCCTATG AAGCCGCGTT CGAGGCGGCT
GCCAGGGTCC TGCGCAATGG TGATTTGCTG GCCATCTTCC CCGAGGGGGG CATCACCAGG
GATGGCGAGC TCCAGGTGTT CAAGGCCGGC ATCATGAAAA TCCTCGAGAA CGCCGAGCGC
GATGGCCTCA GCGTGCCGGT CATTCCGATG GCTTTAACCA ACCTGTGGGG CTCATTCTTC
AGCCGGGTGG AGCAGGTGCG CGGCGAACAG GTGGCGATGG TGCGGCCCTT CCGGCGCGGT
CTTTTCAGCC GGGTCGGCCT GAATGCAGGG CCCGCCATCG CGCCTGCCGA CGTGCAACCG
GAAGCGCTGC GAACACGCGT GGCCGCTCTC ATGGATGCCT GA
|
|---|
| Protein sequence | MSVDTSALVA PPAAHEHPNQ FALLKQRRFA PFFWTQFSGA ANDNLFKFAF TVMVTYQLSV
SWLPPALAGL VIGALFILPF LLFSATSGQL TDKFEKTRVI RFVKNLEVVI MLIAAAGFMS
NNANVQVPVL LGCTFLMGLH STIFGPVKFA YLPQALNERE LTGGNGMVEM GTFVAILLGQ
VVGGLMVAVP QVGPDYVAIA CVLLALVGRA VSQFIPLTPA TDPGLRINWN PVTETWRNLR
LARDNVVVFR SMLGISWMWF FGAVFLSQFP SFAKEVLHGN EQVASLLLVV FSIGIATGSL
LCEVLSKRHV EIGLVPVGAI GMSVFAVDLY FASRGLPPAP VMSVGAFMLH QAHWRVMIDL
ALLSLFAGLY SVPMYALIQL RSPPTHRARI IAANNILNAL FMIVSAILAG ALLKSGFSIP
QIFLLVGLAN AVVGFYIFLL VPEYLLRFIA LVASRLVYRF KIQGDDNIPA QGAAVLTCNH
VSFVDPVLLM AASPRPIYFL MDHRIFKMPV LGWLFRLAKA IPIAPRAEDP VAYEAAFEAA
ARVLRNGDLL AIFPEGGITR DGELQVFKAG IMKILENAER DGLSVPVIPM ALTNLWGSFF
SRVEQVRGEQ VAMVRPFRRG LFSRVGLNAG PAIAPADVQP EALRTRVAAL MDA
|
|---|
| |