Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0430 |
Symbol | |
ID | 4011531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 446800 |
End bp | 447351 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637940115 |
Product | hypothetical protein |
Protein accession | YP_547292 |
Protein GI | 91786340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0688488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAC CGTTCTTTGG CAAGCGAGAA AATGAGACGT CTACCACGTC CCCCAATCTG CGTGGTGCGT CCAATGGTTA TGGGACCTCA GGCACCTCCA GCACGCTGCA GTCCGCTTCT GCGGCTGCCA ATCAGCAAAG CAATGCCAAA CCTGTGAATG ATGCTTCTGC CTCTACCAGC AAGGAAGGCG GGAGCAAGCT GACGGTCGGA CCCAACATCA AGCTCAAGGG CGTGGAAATC ACCGACTGCG ACACCCTGGT GGTGGAAGGC CTGGTCGAGG CCACGATGGA TTCGCGCGTG ATCCAGATTG CAGAGCAGGG CGCCTTTAAG GGATCGGCTG ACATTGACGT CGCAGAGATT CGCGGCGAAT TCAACGGCAA TCTGACGGTG CGCCAGAAAC TGGTGATCTA TTCGACCGGC AAGGTGACCG GCACCATTCG CTATGGCAAG CTGGTGATTG AAGAGGGTGG CCAACTCTCG GGTGAAATCC AGTTCGGTGC ATTGGGCAGC AAGCCTGCGG CCATGGTCAA GCCTGGTTTG CAGGCGGTCT AG
|
Protein sequence | MATPFFGKRE NETSTTSPNL RGASNGYGTS GTSSTLQSAS AAANQQSNAK PVNDASASTS KEGGSKLTVG PNIKLKGVEI TDCDTLVVEG LVEATMDSRV IQIAEQGAFK GSADIDVAEI RGEFNGNLTV RQKLVIYSTG KVTGTIRYGK LVIEEGGQLS GEIQFGALGS KPAAMVKPGL QAV
|
| |