| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0192 |
|---|
| Symbol | |
|---|
| ID | 4012236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 209796 |
|---|
| End bp | 211076 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637939876 |
|---|
| Product | lysophospholipid transporter LplT |
|---|
| Protein accession | YP_547055 |
|---|
| Protein GI | 91786103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.578876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.814713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG GTTTTTACAC CATCATGGCG GCCCAGTTTT TCAGCTCGCT GGCTGATAAC
GCGCTGTTTG TAGCCGCCGT GGAACTGCTG AAAACCAGCG GGGCGCCCAA GTGGCAGCCC
GCGGCGCTGG TGCCCATGTT CGCGCTGTTT TACGTGGTGC TGGCGCCTTT TGTCGGCGCC
TTCGCCGATG CGCGGCCCAA GGGCCAGGTG ATGTTTGTGA GCAATGGCAT CAAGGTCGTG
GGTTGCCTGA TGATGCTGTT TGGCTCGCAC CCCCTGTTGG CCTATGCCAT CGTCGGGCTC
GGCGCTGCCG CCTACTCGCC GGCCAAATAC GGCATCCTGA CCGAACTGCT GCCGGCCTCG
CAACTGGTCA AGGCCAATGG CTGGATCGAG GGCCTGACCA TCTCGTCGAT CATTCTGGGC
GTGCTGCTGG GGGGACAACT GGTGGGCCAC TCGGTGTCCA GCCTGCTGCT GTCGATCGAC
TTGCCCGTCA TCAATACCGG CGTCGACACC GCCCCCGAAG CCGCCATTGC CGTGCTGATC
CTGCTGTACA GCATTGCCGC CTGGTTCAAC ACCCGCATCC CCGACACCGG CGTCGAAATG
CGTCCCATGC CGCGCAACAA GCTGGAGCTG CTGCCCGACT TCTGGAACTG CAACGCGGCG
CTGTGGCGCG ACAAGCTGGG CCAGATCTCG CTGGCCACCA CCACGCTGTT CTGGGGCGTG
TCGGGCAACC TGCGCTATAT CGTGCTGGCC TGGAGTGCGG CCGCCCTGGG CTACAGCACC
ACGCAGGCCT CTTCGCTGGT GGGTGTGGTG GCCATCGGCA CCGCCGTGGG TGCGATCCTG
GCCTCGATGC GCATGCGCCT GGACCAGGCC GCGACCGTGA TGCCGCTGGG CATTGCCATG
GGTCTTCTGG TCATCCTGAT GAATTTCATT GGCAACGTCT GGATCGCCGC GCCCTTTCTG
ATCCTGCTGG GCGGCCTGGG CGGTTTTCTG GTGGTGCCCA TGAATGCGCT GCTGCAGCAC
CGGGGCCACA ACCTCATGGG CGCAGGCCGC TCGATCGCCG TGCAGAATTT CAACGAACAG
GCCTGCATCC TGAGCCTGGG CGCTTTCTAC AGCCTGTCCA CCGGCATGGG CCTGTCGGCC
TTCGGTGCCA TCACCGCCTT TGGCATGGTG GTGGCCAGCT TCATGTGGCT GATCCAGCGC
TGGCACAAAA GCAACTGCAT CAAATACAAG GAGCAGGTGG ATCACCTGCT CAGCATCGCC
CGCAGCGACA AATTCCACTG A
|
|---|
| Protein sequence | MKRGFYTIMA AQFFSSLADN ALFVAAVELL KTSGAPKWQP AALVPMFALF YVVLAPFVGA
FADARPKGQV MFVSNGIKVV GCLMMLFGSH PLLAYAIVGL GAAAYSPAKY GILTELLPAS
QLVKANGWIE GLTISSIILG VLLGGQLVGH SVSSLLLSID LPVINTGVDT APEAAIAVLI
LLYSIAAWFN TRIPDTGVEM RPMPRNKLEL LPDFWNCNAA LWRDKLGQIS LATTTLFWGV
SGNLRYIVLA WSAAALGYST TQASSLVGVV AIGTAVGAIL ASMRMRLDQA ATVMPLGIAM
GLLVILMNFI GNVWIAAPFL ILLGGLGGFL VVPMNALLQH RGHNLMGAGR SIAVQNFNEQ
ACILSLGAFY SLSTGMGLSA FGAITAFGMV VASFMWLIQR WHKSNCIKYK EQVDHLLSIA
RSDKFH
|
|---|
| |