Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0150 |
Symbol | |
ID | 4012118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 156670 |
End bp | 157923 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637939834 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_547013 |
Protein GI | 91786061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATCA ACTCACGTCT TGCCGGCTTC GGCGTTGCCG GTGCCGTTGC CGCCATCGTG GCGCTGGGCA CCGCGCTGCC GGCGGCAGCC CAGGGGGTTT CCGCTGCGGC GGCACCTCCG TCCCCGGCCG CCAACACGCT CAAGATTGGC GTGATAGGTC CCTTCACCGG TGCGTCATCC GACTTCGGCG TGCCCATGCT CAACGGCATC CAGCAGGCTG TGGACGAGAT CAATGCGGTG GGCGGCTACC TGGGCCGCAA GCTGGAGATT GTGCGCAAGG ACGACAAGGC CAACCCCGAT GTGGGCCTGA AAATGTCGCA GGAACTGGTC GCCGAAAAAG TGTCTGTAAC CCTTGGCTTT TGCAATACCG GCGTGGCCGC CAAGTCGCTG GAGGTCTACC AGGCCAACAA GCTGCCACTG ATCATTCCGT GCGCCACCGG CTCGCCGCTC ACGGCGAAAT ACCCCGCAGC GGAGAGCTAT ATCTTTCGCA CGTCGGCCAG CGACAGCATC CAGGCCCCGT TCGTCGTGGA GGACATCCTC AAGCGCGGCT GGAACAGGGT GGCGGTGTTT GCCGACACCA CCGGGTATGG CGAAGCCGGC CTGCAGGATG TGGAAAAGGC GTTGGCCGCC AAAAACCTCA AGCCCGTTTA TGTCGCCCGT TTTGCGCTGG GCGTGAAGGA CCTCGGCGAA GAATTGAAGG CCGCCAAAGC GGCGGGCGCC AACGTGGTGT TCAGCTATAC CGTGGGACCG GAGAACGCCG TGATCGCGCA TGGCCGCCAG GCCCTGAACT GGAAGGTGCC GCAAGTGGGC GCATGGACCT TGTCATTTCC GTTTTTCATC GATGGCGGAA AGGATGCGGC CGATGGCGCA CTGATGGCGC AGACATTCAT TGCCGAGCCC AGCAACGAGC GACGCGCTTC TTTTCTGACC AGTTACGCCC GCAAATTCAA TGTCAGGAAA ATTCCGGTGC CCATGGCGGC TGCGCAGGGC TATGACGCCG TCTACCTCCT GATCTACTCG CTGTTCGGCA TACGCGACGG CAACCTCAGC GGCCCTGCCA TCAAGGCCGC CCTTGAAAGC AAGAGCCGCA CCTATTACGG CGTGGTGGCT ACCTATGACC AGCCTTTCAG CAAGCAGGAC AAAGACGCCA CCACGCAGAA CATGCTGGTG ATGGGCATGG TGAAAAATGG CGCAGTCACG TTTGCCTACC CCGAGGATGC CAAGCGCAAC CTGTTTGTGC AGCGCAAGCA GTAG
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Protein sequence | MFINSRLAGF GVAGAVAAIV ALGTALPAAA QGVSAAAAPP SPAANTLKIG VIGPFTGASS DFGVPMLNGI QQAVDEINAV GGYLGRKLEI VRKDDKANPD VGLKMSQELV AEKVSVTLGF CNTGVAAKSL EVYQANKLPL IIPCATGSPL TAKYPAAESY IFRTSASDSI QAPFVVEDIL KRGWNRVAVF ADTTGYGEAG LQDVEKALAA KNLKPVYVAR FALGVKDLGE ELKAAKAAGA NVVFSYTVGP ENAVIAHGRQ ALNWKVPQVG AWTLSFPFFI DGGKDAADGA LMAQTFIAEP SNERRASFLT SYARKFNVRK IPVPMAAAQG YDAVYLLIYS LFGIRDGNLS GPAIKAALES KSRTYYGVVA TYDQPFSKQD KDATTQNMLV MGMVKNGAVT FAYPEDAKRN LFVQRKQ
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