| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7348 |
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| Symbol | |
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| ID | 6280693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 76688 |
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| End bp | 77392 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642619527 |
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| Product | type IV secretion system family protein |
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| Protein accession | YP_001893562 |
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| Protein GI | 187921973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.260808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCC GAAAACTGGT TGTTTCCACT TTTGCCGCGT TCTCTTTTTC GCTCGCCAAC
GCCCAGGGCG TGCCGGTTTA CGACAACGCC GCGAACATCG CCCTGCTTCA GCAGGTTGTT
TCGGCTGGGC AGCAGTTGGC TCAGTTGCAG CAGCAGTATC AGCAGCTTCA GCAGACGTTC
AATGCGCTCA ACGGCTTGCG GAACATTTCG AGCCTGTTGA GCAATCCCCT TTTGTCTCAG
ATGCTTCCGC CGGACCTTGC GTCGACAATC AATTCGCTGC GCAGCGGCAA CGTGACCGGT
TCCCTCGCGG GCATCAGCGG AAACCTACAG CAGCTCGCGC ATCAGAATGC AAAGATCGAC
TGCCAGAACC AGTGGGGGCC GAATAGCCCG TCGTACTACT CGTGCGTCAA CAAGTGGCAG
CAGGCATCGT TCTCGTCTTA CGTCGGCCAG CAGGGCTATG ACCAGTCGGC GCAAAACATC
GCGAACCTGC AACAGTTCCT CTCCGCAATT CAGACCTCGC CCGACCCGAA ATCGTTGCAG
GACTTGCAGG CGCGCATTTC GCTCGAACAG GTCAAACAGC AGAACGAGGC CATCAAGCTC
AAGGGCATCG AAATGATGCA GCAGGCACAG GAAAAGATGG ATCACCAGAA CGCCGTGCAG
TCGACGCAGC AGATGATGTT GACCGGGCAG GGGATTCGCT TCTGA
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| Protein sequence | MMIRKLVVST FAAFSFSLAN AQGVPVYDNA ANIALLQQVV SAGQQLAQLQ QQYQQLQQTF
NALNGLRNIS SLLSNPLLSQ MLPPDLASTI NSLRSGNVTG SLAGISGNLQ QLAHQNAKID
CQNQWGPNSP SYYSCVNKWQ QASFSSYVGQ QGYDQSAQNI ANLQQFLSAI QTSPDPKSLQ
DLQARISLEQ VKQQNEAIKL KGIEMMQQAQ EKMDHQNAVQ STQQMMLTGQ GIRF
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