| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7222 |
|---|
| Symbol | |
|---|
| ID | 6279015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3607900 |
|---|
| End bp | 3609147 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642618242 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001890878 |
|---|
| Protein GI | 187921846 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAA AAACACTCGA CGCCGCATCG ACTTCCGAGG CCACCGAAGC TACCGAAGCC
GCCGAAGCAG CGCAACGCCT CCCCACGCTG ATGCTCGCCG CGTCGCTATC GCTGGGCAGC
GCAATCGCGC TCGGACTCGC CCGCTTCGCC TACGCGCTGC TGTTGCCGTC GATGAAACTC
GACCTCGGGT GGAGTTTCGC CCAAGCCGGC GCGATGAATA CGGCCAACGC GCTGGGTTAT
CTGCTTGGCG CGCTGGCTTT TCCGCGCCTC GCGCGCCGCT GGTCGGCCGG CGCAGTGTTC
AGCGGCGGTT GCGTGGCGAC CGCGCTGCTG ATGGCGGGCA GCGGCTTGCT TGCCGACACG
AACGCGCTGC TCGCCTTGCG CGTGATTACC GGCGTGAGCA GCGCGGCGAT TTTCATCAGC
GGCGGCGTGT TGGCCGCGCG GCTTGCATCG GCGAGACCGC ACGATGCGGG GCTCGTCCTC
GGCTTGTATT ACGGCGGTAC AGGGTGGGGG ATCGTGGCGT CGTCGGTGCT GGTGCCGTTG
ACCATCTTCA ACGTCGCGCA CGGCTGGCAG TACGCGTGGT TCGCACTCGC GCTCGCGTGT
GCGGTGCTCG CGGCGGTGGC CGTCGGCGCG GCGCGAAAAA TCGAGCGCGT GCACGCGATG
GCGTCATCGG CCGCGCAATC ACTCGGCGCC GCCGATGCAC CCCGCTGGCC GCGCTTCAGT
CTCGCGCTGG CGGGCTATAC GTTGTTCGGC GTCGGCTATA TCGGCTACAT GACGTTTATC
GTCGCGCTGT TGCGCAATGC GGGCATGAGC GCGGCTGTCG TCACGTGCTT CTATCTGCTG
CTCGGTGTGG CGACCGTGGT CTCGGCGCGC GTGTGGTCAG GACTGCTCGA CCGCATGCGC
GGCGGCCAGG CGCTCGCAGT GCTGAATGCT TTGCTCGCGA TCGCGACGTT GTTGCCCGCG
CTCTTCACTC AGCCATGGGT GGCGTTGGTA TCTGGCGTAT TGTTCGGCGC GACGTTTCTC
TCCGCCGTGG CGTCGACCAC GGCTTTCGTG CGCCACAATC TGCCCGCGAG TCATTGGGCC
AAAGGCATCA GCGCGTTCAC GATCGTGTTC GCGTTCGGAC AGATCGTCGG ACCGATGGTG
ATCGGCTGGG TCTCGGACGG CGCGGGTCTC GCGCGCGGGC TGGTTTATTC CGCGCTGCTG
CTCGCGGCGG GCGCGGTGTT GGCAGCGTGT CAGAAGCCGT TGCGCTGA
|
|---|
| Protein sequence | MPTKTLDAAS TSEATEATEA AEAAQRLPTL MLAASLSLGS AIALGLARFA YALLLPSMKL
DLGWSFAQAG AMNTANALGY LLGALAFPRL ARRWSAGAVF SGGCVATALL MAGSGLLADT
NALLALRVIT GVSSAAIFIS GGVLAARLAS ARPHDAGLVL GLYYGGTGWG IVASSVLVPL
TIFNVAHGWQ YAWFALALAC AVLAAVAVGA ARKIERVHAM ASSAAQSLGA ADAPRWPRFS
LALAGYTLFG VGYIGYMTFI VALLRNAGMS AAVVTCFYLL LGVATVVSAR VWSGLLDRMR
GGQALAVLNA LLAIATLLPA LFTQPWVALV SGVLFGATFL SAVASTTAFV RHNLPASHWA
KGISAFTIVF AFGQIVGPMV IGWVSDGAGL ARGLVYSALL LAAGAVLAAC QKPLR
|
|---|
| |