| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7173 |
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| Symbol | |
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| ID | 6278072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3566704 |
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| End bp | 3567474 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618194 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001890830 |
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| Protein GI | 187921798 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCA AAGTCGCCAT CGTGACGGGC GCAAGCCAGG GTATCGGCCG TTCGACGGCC
GTCAGACTGG CGCGGGATTT TGATTCGATC GTGCTTGTGG CCCGCAACCG CGCGAACCTT
GAAGAGACCG CCGTTGAGGT GAAGAAGGCC GGCGCGGAGA CGCTCGTTAT CGACGCCGAT
CTCGCCCGAC CTGACGCCGC GCAACAAGTC GTCGAGCGAA CGCTGGCGAC GTTCGGGCGG
ATCGACGCCT TGCTCAACAT TGCCGGCGCG GTGCCGCAAA TCGATGTACT GGAGATGACC
GATGAGCAAT GGGACCACGG TCTCGCGCTC AAGCTGCACG GCGCGCGTCG ACTGACGATC
GCGGCGTGGC CGGCACTGAA GGAGAGCTCA GGATCGGTCG TGCTGATGTC GGGGAATTCC
GCGCTGTTTC CCAAGGCGCC CTATGCCGCG GTAGGCACGA TCAACGCGGC GATCGTGGCG
CTCGCGAAAG CGTTCTCGGA TCGCGGCATT GCCGATGGCG TGCAGGTCAA CAGCGTGCTG
CCGGGGCCTG TGATGACCGG CCGGCGACGC TCGTACCTGG TGCATTGGGC TCCGCTGCAC
AACATGTCCG TCGAAGAAGC GACAGCGAAG TTTCCCGTTG AAGCCGGTAT CACGCGTTAC
GGCACGCCGG AGGAGATTGC CGAATTGATG GCGTTCGTCG TGTCGCCCGA GGCGCGCTGG
ATGACGGGAT CGAGCTTGCG GATGGACGGT GGAGAAGTGA AGTCGATTTG A
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| Protein sequence | MPSKVAIVTG ASQGIGRSTA VRLARDFDSI VLVARNRANL EETAVEVKKA GAETLVIDAD
LARPDAAQQV VERTLATFGR IDALLNIAGA VPQIDVLEMT DEQWDHGLAL KLHGARRLTI
AAWPALKESS GSVVLMSGNS ALFPKAPYAA VGTINAAIVA LAKAFSDRGI ADGVQVNSVL
PGPVMTGRRR SYLVHWAPLH NMSVEEATAK FPVEAGITRY GTPEEIAELM AFVVSPEARW
MTGSSLRMDG GEVKSI
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