Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7173 |
Symbol | |
ID | 6278072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3566704 |
End bp | 3567474 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618194 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001890830 |
Protein GI | 187921798 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCA AAGTCGCCAT CGTGACGGGC GCAAGCCAGG GTATCGGCCG TTCGACGGCC GTCAGACTGG CGCGGGATTT TGATTCGATC GTGCTTGTGG CCCGCAACCG CGCGAACCTT GAAGAGACCG CCGTTGAGGT GAAGAAGGCC GGCGCGGAGA CGCTCGTTAT CGACGCCGAT CTCGCCCGAC CTGACGCCGC GCAACAAGTC GTCGAGCGAA CGCTGGCGAC GTTCGGGCGG ATCGACGCCT TGCTCAACAT TGCCGGCGCG GTGCCGCAAA TCGATGTACT GGAGATGACC GATGAGCAAT GGGACCACGG TCTCGCGCTC AAGCTGCACG GCGCGCGTCG ACTGACGATC GCGGCGTGGC CGGCACTGAA GGAGAGCTCA GGATCGGTCG TGCTGATGTC GGGGAATTCC GCGCTGTTTC CCAAGGCGCC CTATGCCGCG GTAGGCACGA TCAACGCGGC GATCGTGGCG CTCGCGAAAG CGTTCTCGGA TCGCGGCATT GCCGATGGCG TGCAGGTCAA CAGCGTGCTG CCGGGGCCTG TGATGACCGG CCGGCGACGC TCGTACCTGG TGCATTGGGC TCCGCTGCAC AACATGTCCG TCGAAGAAGC GACAGCGAAG TTTCCCGTTG AAGCCGGTAT CACGCGTTAC GGCACGCCGG AGGAGATTGC CGAATTGATG GCGTTCGTCG TGTCGCCCGA GGCGCGCTGG ATGACGGGAT CGAGCTTGCG GATGGACGGT GGAGAAGTGA AGTCGATTTG A
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Protein sequence | MPSKVAIVTG ASQGIGRSTA VRLARDFDSI VLVARNRANL EETAVEVKKA GAETLVIDAD LARPDAAQQV VERTLATFGR IDALLNIAGA VPQIDVLEMT DEQWDHGLAL KLHGARRLTI AAWPALKESS GSVVLMSGNS ALFPKAPYAA VGTINAAIVA LAKAFSDRGI ADGVQVNSVL PGPVMTGRRR SYLVHWAPLH NMSVEEATAK FPVEAGITRY GTPEEIAELM AFVVSPEARW MTGSSLRMDG GEVKSI
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