| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7116 |
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| Symbol | |
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| ID | 6280004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3506519 |
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| End bp | 3507793 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642618138 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001890774 |
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| Protein GI | 187921742 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACGG CAGCCACCCA CCGTGCCATC GAGGCAGTCT GGCGGATCGA ATCCGCCAAG
GTCATCGCCC ACGTCGCGCG GATCGTGCGC GACGTCGGGC TTGCCGAGGA ACTGGCGCAA
GACGCGCTGG TGTCCGCGCT CGAACATTGG CCCGACGCGG GCGTGCCCGA CAACCCGGGA
GCATGGCTGA TGGCGACCGC AAAGAACCGT GCCCTCGACC GCTTGCGGCA GGAAGCGCTG
CATGCCCGCA AGCACCAGGA GCTGGGTCAC GATCTCGACG CGATGGAGGC GCATCTCGTG
CCCGATTTCG TCGATGCTCT CGATGCCGCC CGCGCCGACG ATATCGGCGA CGATCTGCTG
CGGCTCGTGT TCACCGCGTG CCACCCGGTG CTATCGACCG ATGCGCGCGT CGCGCTCACG
TTGCGTCTGC TCGGCGGCCT CACCACGGAC GAAATCGCGC GCGCGTTTCT CGTGCCCGAG
CCGACCGTCG CACAGCGCAT CGTGCGGGCC AAGCGCACGC TGTCGGCGGC CAAGGTGCCG
TTCGAGGTGC CGCAAGCGGA CGCACGCGCG CCGCGGCTCG CTTCGGTGCT GCAGGTCATC
TATCTGATTT TCAACGAAGG CTATTCGGCC ACGGCCGGCG ACGACTGGAT GCGTCCGGCG
CTCTGCGAGG AAGCGCTGCG GCTCGGCCGC GTGCTGAGCG GTCTCGTGCC CGACGAAAGC
GAAGTGCACG GCCTCGTCGC GCTGATGGAG ATTCAGGCCT CGCGCACGCA TGCGCGCACG
GACGCGCAAG GCCGTCCGGT GCTGCTGCTC GATCAGGATC GCAGCCGCTG GGACCCGCTT
CTGATCCGCC GTGGACTGGC CGCGCTCAAC AGCGCGCATG CGCTGGGCGG CGCGAGCGGC
CCGTACGCGT TGCAGGCAGC GCTCGCCGCA TGTCACGCCC GTGCGCGTCG CGCGGAAGAT
ACCGACTGGG CGCAGATCGT CGCGCTGTAT GACGCGCTGT CGCAAGTGGC GCCGTCGCCG
GTGGTCGAGT TGAACCGCGC GGTGGCGGTC GGCATGGCGT TCGGTCCGGC GGCCGGTTTG
GAGATCGTCG ATGCACTGGC AAGCGACGCT GCGCTGGCGA ACTATCACTG GCTGCCGAGT
GTACGCGGCG ATCTGCTAGC CAAGCTGGGA CGCATGGAAG AAGCGCGCGC AGAATTCGAA
CGGGCCGCCG GGATGACGCG CAATGCGCGC GAGCGCGAGC TGCTGCTCGA ACGCGCGCAC
GGTATCGGGC ATTGA
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| Protein sequence | MTTAATHRAI EAVWRIESAK VIAHVARIVR DVGLAEELAQ DALVSALEHW PDAGVPDNPG
AWLMATAKNR ALDRLRQEAL HARKHQELGH DLDAMEAHLV PDFVDALDAA RADDIGDDLL
RLVFTACHPV LSTDARVALT LRLLGGLTTD EIARAFLVPE PTVAQRIVRA KRTLSAAKVP
FEVPQADARA PRLASVLQVI YLIFNEGYSA TAGDDWMRPA LCEEALRLGR VLSGLVPDES
EVHGLVALME IQASRTHART DAQGRPVLLL DQDRSRWDPL LIRRGLAALN SAHALGGASG
PYALQAALAA CHARARRAED TDWAQIVALY DALSQVAPSP VVELNRAVAV GMAFGPAAGL
EIVDALASDA ALANYHWLPS VRGDLLAKLG RMEEARAEFE RAAGMTRNAR ERELLLERAH
GIGH
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