| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7050 |
|---|
| Symbol | |
|---|
| ID | 6279165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 3431319 |
|---|
| End bp | 3431954 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642618073 |
|---|
| Product | DNA/RNA non-specific endonuclease |
|---|
| Protein accession | YP_001890709 |
|---|
| Protein GI | 187921677 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.108993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGA AAACGCGCAT GCTTTGTTAT AGCGATTTCG CGGTTTTGCA TTCGGGCATC
ACGCACGGTC CGCTGTGGTC CGCCGAACAT CTGACGCGCG ATCACATCGA GGCCGCCAAA
GACATGGTGC GCACCAACAA GTTCTTTGAA GACGCGCGCC TGCCGGACGG CGAAGGCGCC
ACGCTCGCGG ACTACAAGCG CAGCGGATTC GACCGCGGCC ACATGAGCCC GGCGGGCAAT
CGCTGGAATC AGGAGGCGAT GGCACAATCG TTCTCGCTCG CCAACGTCGT GCCGCAAAAC
CGCGAGAACA ACCAGCGTTT GTGGGCGCGC ATCGAGACCT CCGTGCGCAA GATCGCGGTG
TCGTACGACG ATACCTATGT GGTCACCGGC CCGATCTTTA ACGGCCAGCA GCTGCAGACT
ATCGGACCGA CGCGCGTGTT CGTGCCAACG CAATTGTTCA AGGTGGTCTA CGTGCCGTCG
CGGAAGATAG CGTTCGCCGT GGTGGTGGAC AATGTGTCGA CGAACCGTTA CGACATCAAG
ACGATTCACG AACTCGAAGC AACATCGGGC ATCCGTTTTC CGGGTATTCC GGAGGACCTC
AAAGACCAGC GACCGGGAGG ACTGAAAGGT GTTTAA
|
|---|
| Protein sequence | MAPKTRMLCY SDFAVLHSGI THGPLWSAEH LTRDHIEAAK DMVRTNKFFE DARLPDGEGA
TLADYKRSGF DRGHMSPAGN RWNQEAMAQS FSLANVVPQN RENNQRLWAR IETSVRKIAV
SYDDTYVVTG PIFNGQQLQT IGPTRVFVPT QLFKVVYVPS RKIAFAVVVD NVSTNRYDIK
TIHELEATSG IRFPGIPEDL KDQRPGGLKG V
|
|---|
| |