Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7038 |
Symbol | |
ID | 6278099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3420515 |
End bp | 3421687 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618061 |
Product | hopene-associated glycosyltransferase HpnB |
Protein accession | YP_001890697 |
Protein GI | 187921665 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000681734 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGTGG TTCTGTTTCT TCTGTCTTGT CTCTCCTTGC TGATCTGGTG TGTGCTGCTG TTCGCGCGCG GCGGTTTCTG GCGCGCGCGT CCCGCCGCGC CCCTGACCAT CGCGCCGCGC GCAACGTGGC CCGCCGTGGC GGCCGTGGTG CCGGCCCGCA ATGAAGTCGA TGTAATCGCC GAGGCGGTCA CCACGCTGCT TCAGCAGGAC TATGCAGGCG AATTCCACGT GATCGTCGTC GACGACCACA GCACCGACGG CACCGCCGAC GCCGCTCGCG CGGCCGCCCT GCAGTTGCAA TGCCCGGACC GTCTGACCGT GTTGAGCGCG AAGCCGCTGC CGCCGGGCTG GTCCGGCAAG GTGTGGGCAC AGTCGCAAGG TATCGAGGCC GTGCGCACGC TCGGCTTGCC CGCGGATTTC CTTCTGCTGA CCGACGCCGA CATCGGCCAT CCCGCCGACG CAGTCGCGCA ACTCGTCGCG CGCGCGGACG CAGAGCAGCG CGATCTCGTC TCGCTGATGG TGCGTTTGCG CTGCGATTCG TTCTGGGAAA AAGCGCTGAT TCCCGCTTTC GTGTTCTTCT TCGCCAAGCT GTACCCGTTC TCGTGGGTCA ACAACCCGCG CAATCGCACG GCGGCGGCCG CGGGCGGCTG CATGCTGGTG CGCCGTAGCG CGCTCGAAGA AGCGGGCGGC ATCGAGTCGA TCCGCGCCGA GTTGATCGAC GACTGCAGCC TCGCCGCGCG CATCAAGCAT CGCGGCACGG GGCGTCATCC GATCCGGCTG GATGTGGCGG CGCGCAGTGT GTCGCTGCGT CCGTACGACA GCTGGCGTGA GATCTGGAAC ATGATCGCGC GCACGGCCTT CACGCAATTG CGCTACTCAC CGCTGCTGCT GGCGGGCACG CTGGCCGGCA TGACGATCAT TTACCTGATG CCGCCGGTCG CCGCGCTGGT GCTCGGTCCG ACGGGCTGGC CGGCGTGGCT CGCGTGGGCG GCCATGTGCT GCGCTTATGC GCCGATGCTC AGCTATTACC GTCGCTCGCC GTTGTGGGCG CCGTTTCTGC CGCTGATCGC GTTGTTCTAT GTCGGCGCGA CGTTCGCGTC GGCGGTTCGT TACTGGCGCG GCAAAGGCGG ACAATGGAAG GCGCGGGTTC AGGCGCCGGT GCAGGAACGC TGA
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Protein sequence | MAVVLFLLSC LSLLIWCVLL FARGGFWRAR PAAPLTIAPR ATWPAVAAVV PARNEVDVIA EAVTTLLQQD YAGEFHVIVV DDHSTDGTAD AARAAALQLQ CPDRLTVLSA KPLPPGWSGK VWAQSQGIEA VRTLGLPADF LLLTDADIGH PADAVAQLVA RADAEQRDLV SLMVRLRCDS FWEKALIPAF VFFFAKLYPF SWVNNPRNRT AAAAGGCMLV RRSALEEAGG IESIRAELID DCSLAARIKH RGTGRHPIRL DVAARSVSLR PYDSWREIWN MIARTAFTQL RYSPLLLAGT LAGMTIIYLM PPVAALVLGP TGWPAWLAWA AMCCAYAPML SYYRRSPLWA PFLPLIALFY VGATFASAVR YWRGKGGQWK ARVQAPVQER
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