| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6980 |
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| Symbol | |
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| ID | 6278191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3356713 |
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| End bp | 3357471 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642618003 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001890639 |
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| Protein GI | 187921607 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCT CTTCCCCTAT CTGTGCGATC GTCACTGGCC ACACACGCGG TCTGGGCGCG
GCGCTCGCCG AACAACTTCT GGCTCGCGAT ATCGCCGTGC TCGGATTGTC CCGCTCGCGT
CATGCCACGC TCAAAGCGCG CTTCCCGGCG CTGCTCGAAG AAATCGAACT GGAACTGGCC
GACACCACAC GCGTCGCACA ATGGATCGCA AGCGATGCGC TGCGTGAATT CGTCAGCGGC
GCGCAAACGG TTCTGCTGAT CAACAACGCG GGCATGGTGC AGCCCATCGG ACCGATTGAA
GGACAAGACG CGGCATCTAT CGCGACCGCC GTGAGCCTCA ATGTCGCCAC ACCCTTGATG
CTGGCCAGCG CGCTGGCCGC AGCCGCCGTC GACGCAACCG ACCGCCGCAT CGTGCACATT
TCCAGCGGCG CGGCGCGCAA CGCGTACCCC GGCTGGAGCA TCTATTGCGC GACAAAGGCT
GCGCTCGACC ATCACGCGCG CGCCGTCGCG CTCGATGCGA ATCGTGCATT GCGCATCTGC
AGTCTGGCGC CGGGTGTGAT CGATACGAAT ATGCAGGCGG AGATTCGCGG CAGCGGTGTC
GAACAATTCC CCATGCGCGA GCGATTCGAA GAACTCAAGC GCAACGGCCA GCTGTCGACG
CCTGAACAAT GTGCGACCAA GTTGCTCGAT TACGCCTTGA GCGATGCATT CGGCCAAACG
CCGGTCGCGG ACATTCGCGA GATCGCAAAG CCGGCGTAA
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| Protein sequence | MTTSSPICAI VTGHTRGLGA ALAEQLLARD IAVLGLSRSR HATLKARFPA LLEEIELELA
DTTRVAQWIA SDALREFVSG AQTVLLINNA GMVQPIGPIE GQDAASIATA VSLNVATPLM
LASALAAAAV DATDRRIVHI SSGAARNAYP GWSIYCATKA ALDHHARAVA LDANRALRIC
SLAPGVIDTN MQAEIRGSGV EQFPMRERFE ELKRNGQLST PEQCATKLLD YALSDAFGQT
PVADIREIAK PA
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