| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6886 |
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| Symbol | |
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| ID | 6277608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3245820 |
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| End bp | 3247097 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617913 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001890549 |
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| Protein GI | 187921517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.653272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.230244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACGA TAACGATCGC TGCCGATTCG ACGCCTGAAT CAAGTGGCCG ACTCAAGCGC
GAGTTGAAGG CCGCGGAAGC CAGAAAGCGT GCGATGGCGC TGCTGCTGAT CGCGCCGCTC
GCGATTTTTC TACTGCTGAT TTTCGTCGTG CCCATCGGTG CGCTGCTCAC GCGCGCCGCG
CAAAATCCCG AGGTCGTCAA CGCGCTGCCG CATACGGTCG CCTCGTTGAG CGCGTGGGAT
CGCAAGACGC CGCCGCCGGA CACCGCGTAT ACCGCGCTGG CGGTCGACCT CGCCGCGATC
GCCGACAGCG ACGGCATGGG CGCGCTCGCG CGACGCCTGA ACGTGGAGAT TCCCGGCTAC
CGTTCGCTGG TTGCCAAGTC CGCGCGCGCC ATGCCGTTCG TCGACGACAA CAGCAAGCCG
CTGCAACTGA CGCCCGCCCA GATGCACGCA AAATTCGCCG AACTGGACGA GCGCTGGAAC
GACATTGCGT ACTGGCAAGC CATTGCGAAA AACGCCGGCG CCTATTCGCC GTTTTATCTG
CTGGCTTCGC TGGACCACAA ACAGGACGCG TTCGGCCACA TCATTCCGAC CGATCCGGAT
CAACAGATCT ACCTCGCTGT ATTCAGCCGC ACCTTTGTGA TCGGCGCGGC GGTGACGTTC
TTCGCGTTGT TGCTCGGCTA TCCGCTCGCT TACTGGATTT CGACGCTGTC CGAGCGTCGC
GCGAATCTGG TGATGATTCT CGTGCTGATT CCGTTCTGGA CCTCGATCCT GGTGCGCGTT
GCGGCCTGGA TCGTGATTCT GCAAAGTGAA GGGCTGGTGA ACAAGGCGTT GATCGGCAGC
GGGCTGTTGC ACGATCCGCT GGCGCTGTTG TTCAACCGCA CCGGCGTCTA CATTTCGATG
ACGCACATTC TGCTGCCGTT CATGATCCTG CCGCTCTATA GCGTGATGAA GTCGATTCCG
CCGACCTATC AGCGCGCCGC GATCTCTCTC GGCAGCCATC CGTTCGCCGC GTTCTGGCGC
GTGTATGTGC CCCAGACCTA TCCGGGCATC GGCGCGGGCG CATTGCTGGT GTTCATTCTG
GCGATCGGCT ACTACATCAC GCCGGCCTTG CTCGGCGGAC CGAACGATCA GATGGTCAGC
TACTACGTCG CGTACTTCAC GAACGTGACG ATCAACTGGG GCATGGCGTG CGCGCTCGGC
GGCCTGCTGC TCGCCGCGAC GCTCGTGCTG TACGTCATTT ACGGACGCTT CACGCGCTCG
TCATTGAGCC TCGGCTGA
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| Protein sequence | MTTITIAADS TPESSGRLKR ELKAAEARKR AMALLLIAPL AIFLLLIFVV PIGALLTRAA
QNPEVVNALP HTVASLSAWD RKTPPPDTAY TALAVDLAAI ADSDGMGALA RRLNVEIPGY
RSLVAKSARA MPFVDDNSKP LQLTPAQMHA KFAELDERWN DIAYWQAIAK NAGAYSPFYL
LASLDHKQDA FGHIIPTDPD QQIYLAVFSR TFVIGAAVTF FALLLGYPLA YWISTLSERR
ANLVMILVLI PFWTSILVRV AAWIVILQSE GLVNKALIGS GLLHDPLALL FNRTGVYISM
THILLPFMIL PLYSVMKSIP PTYQRAAISL GSHPFAAFWR VYVPQTYPGI GAGALLVFIL
AIGYYITPAL LGGPNDQMVS YYVAYFTNVT INWGMACALG GLLLAATLVL YVIYGRFTRS
SLSLG
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