| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6859 |
|---|
| Symbol | |
|---|
| ID | 6280375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 3210039 |
|---|
| End bp | 3211055 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642617886 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_001890522 |
|---|
| Protein GI | 187921490 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.750259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.224007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCC TCACACCCGC CGAAGTGCTG TTTGACGGCG AAGTGCCGCC CGCTGTGCTG
CCTGCCTGCG ATCACTACGC CGGCAGCGAA AAGCTGATGC TGAAATCGTT GGCCTTGCAG
CAGCAACTGG GTCCCGTGTT CGACATCACG CTCGATTGCG AAGACGGCGC GCAGGTCGGC
CGCGAAGCCG AGCACGCGGA ACTGGTCGCC TCGTTGCTGG GCGGCGAGCA TGACCGCTTC
GGCCGCGTCG GCGTGCGGAT TCACGACTTC GATCACGCGC ACTGGCGCGA CGACGTCCGC
CTCATTCTGC GTGCCGCGAA GCGAGCGCCT GCTTACATCA CCCTGCCGAA AATCCGCAAC
ATCCCCGATG CCGCCGAAAT GGTCGCGTTC ATCGAGGCGA CGCGGCGCGA ACTGGGCATC
GCGCAACCAG TGCCGGTGCA ATTGCTGGTC GAAACGCACG GCGCACTGAC ACGTGTGTTC
GACCTGGCCG CGCTGCCCGG TGTGGAAGCG CTGAGCTTCG GCCTGATGGA CTTCGTCTCC
GCGCACGACG GGGCGATTCC CGATACCGCC ATGCGCTCGC CCGGCCAGTT CGATCATCCG
CTGGTGCGGC GCGCGAAGCT GGAAATCTCG GCCGCCTGCC ATGCATACGG CAAAGTGCCT
TCGCATAACG TCAGCACGGA GGTGCGCGAC ATGAGCGTGG TCGCCAACGA CGCCGCGCGC
GCCCGCAACG AGTTCGGCTA CACGCGCATG TGGAGCATCC ATCCGGCGCA GATCGAAGCA
ATCGTCGCCG CATTCGCGCC GCGCGACGAA GAGATCGCGA CCGCCACCGA AATCCTGCTT
GCCGCGCAGT CCGCGCAATG GGGCCCGACG CGCCATCACG ACACGCTGCA TGACCGTGCG
AGCTATCGGT ACTACTGGTC GGTGCTACGT CGAGCGCAAG CTACGGGGCG CGCCGTCCCG
CGAGACGCTG CGCCGCTTTT CGCGAAAGTG GGCACTGACG TGCCGGCAGG ATCATGA
|
|---|
| Protein sequence | MRALTPAEVL FDGEVPPAVL PACDHYAGSE KLMLKSLALQ QQLGPVFDIT LDCEDGAQVG
REAEHAELVA SLLGGEHDRF GRVGVRIHDF DHAHWRDDVR LILRAAKRAP AYITLPKIRN
IPDAAEMVAF IEATRRELGI AQPVPVQLLV ETHGALTRVF DLAALPGVEA LSFGLMDFVS
AHDGAIPDTA MRSPGQFDHP LVRRAKLEIS AACHAYGKVP SHNVSTEVRD MSVVANDAAR
ARNEFGYTRM WSIHPAQIEA IVAAFAPRDE EIATATEILL AAQSAQWGPT RHHDTLHDRA
SYRYYWSVLR RAQATGRAVP RDAAPLFAKV GTDVPAGS
|
|---|
| |