Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6829 |
Symbol | |
ID | 6277958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3177848 |
End bp | 3178570 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642617856 |
Product | protein of unknown function DUF81 |
Protein accession | YP_001890492 |
Protein GI | 187921460 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.514518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATATC TGTTGGTGCT GTGCGTCGGA TTGCTGGCCG GCACGTTGAG CGGCGTTGTC GGCACCGGCT CGTCGATGAT GCTAATGCCC GTGCTCGTGA TGCTGTTCGG TCCGCAACAA GCGGTGCCGA TCATGGCGAT TGCCGCGATC ATGGGCAACT TCGGCAAGGT CCTCGCGTGG TGGCGCGAGA TCGACTGGCG CGCATGCGGC GCCTACTGCG TCACGGCCGT GCCGGGCGCG GCGCTGGGTG TGCGAACGCT GCTTGCGTTG CCGCCGCACG CGGTCGAAAT TGCGTTGGGC CTGTTCTTCG TCGCGATGGT GCCCACACGG CGCTGGCTCG CGCGCCGGGA TATCAAGTTC TCGTTGTGGC AGCTTTCCTT GATCGGCGGC GTAGTGGGTT TTCTCACCGG AATCGTCGTG TCCACCGGAC CGATCACCGT GCCCGTGTTC ATGTCTTATG GCCTTGTGAA GGGCGCTTTT CTGGCAACCG AGGCGGCGGG CTCTCTGACC GTTTATGCCG CCAAAGTCGC GGTCTTCAAT CATTTCGGCG CATTGCCGTT GCATGTGGTG ATCGACGGCT TGATCACCGG CTCTGCATTG ATGGTCGGCT CGTTTGCCGC GCGGTCGATC GTGGTTCGGA TGAGCCCATC GACTTTCAAA CTGGTCGTCG ACGGTTTGAT GTTGTCGTCT GGACTTTCAC TGCTTTGGGC GGCGGGGCGC TAG
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Protein sequence | MGYLLVLCVG LLAGTLSGVV GTGSSMMLMP VLVMLFGPQQ AVPIMAIAAI MGNFGKVLAW WREIDWRACG AYCVTAVPGA ALGVRTLLAL PPHAVEIALG LFFVAMVPTR RWLARRDIKF SLWQLSLIGG VVGFLTGIVV STGPITVPVF MSYGLVKGAF LATEAAGSLT VYAAKVAVFN HFGALPLHVV IDGLITGSAL MVGSFAARSI VVRMSPSTFK LVVDGLMLSS GLSLLWAAGR
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