Gene Bphyt_6829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6829 
Symbol 
ID6277958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3177848 
End bp3178570 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID642617856 
Productprotein of unknown function DUF81 
Protein accessionYP_001890492 
Protein GI187921460 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.514518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATATC TGTTGGTGCT GTGCGTCGGA TTGCTGGCCG GCACGTTGAG CGGCGTTGTC 
GGCACCGGCT CGTCGATGAT GCTAATGCCC GTGCTCGTGA TGCTGTTCGG TCCGCAACAA
GCGGTGCCGA TCATGGCGAT TGCCGCGATC ATGGGCAACT TCGGCAAGGT CCTCGCGTGG
TGGCGCGAGA TCGACTGGCG CGCATGCGGC GCCTACTGCG TCACGGCCGT GCCGGGCGCG
GCGCTGGGTG TGCGAACGCT GCTTGCGTTG CCGCCGCACG CGGTCGAAAT TGCGTTGGGC
CTGTTCTTCG TCGCGATGGT GCCCACACGG CGCTGGCTCG CGCGCCGGGA TATCAAGTTC
TCGTTGTGGC AGCTTTCCTT GATCGGCGGC GTAGTGGGTT TTCTCACCGG AATCGTCGTG
TCCACCGGAC CGATCACCGT GCCCGTGTTC ATGTCTTATG GCCTTGTGAA GGGCGCTTTT
CTGGCAACCG AGGCGGCGGG CTCTCTGACC GTTTATGCCG CCAAAGTCGC GGTCTTCAAT
CATTTCGGCG CATTGCCGTT GCATGTGGTG ATCGACGGCT TGATCACCGG CTCTGCATTG
ATGGTCGGCT CGTTTGCCGC GCGGTCGATC GTGGTTCGGA TGAGCCCATC GACTTTCAAA
CTGGTCGTCG ACGGTTTGAT GTTGTCGTCT GGACTTTCAC TGCTTTGGGC GGCGGGGCGC
TAG
 
Protein sequence
MGYLLVLCVG LLAGTLSGVV GTGSSMMLMP VLVMLFGPQQ AVPIMAIAAI MGNFGKVLAW 
WREIDWRACG AYCVTAVPGA ALGVRTLLAL PPHAVEIALG LFFVAMVPTR RWLARRDIKF
SLWQLSLIGG VVGFLTGIVV STGPITVPVF MSYGLVKGAF LATEAAGSLT VYAAKVAVFN
HFGALPLHVV IDGLITGSAL MVGSFAARSI VVRMSPSTFK LVVDGLMLSS GLSLLWAAGR