| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6694 |
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| Symbol | |
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| ID | 6279743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 3009980 |
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| End bp | 3011494 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642617724 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_001890361 |
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| Protein GI | 187921329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.795253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTA AGGAAGATTT TTTACGTTTC GCCGTGATGG TAAACACCAA CCGGCACGAG
TACGGCGAGG CCGTATCGTT TGGTCCGTTC ACACTTTTCC CGACAGAGAG GCGTCTCGAA
CGGTCAGGTT CAGTCGTGCA ACTAGGCAGC CGCGCGCTGG ATATTCTTAT TGCGCTTATC
CAGCACGCCG GACAGGTCGT GGATCGGCGC AAGTTGATGT CGCGTGCGTG GAGGAATATC
GTCGTGGACG AAAGCAACTT GCGCGTCAAC ATTGCTGGAT TGCGCAAAGC ACTGGGTGAC
GGCGAAGACG GTGTGCGTTA CGTGAAAAAC GTCCCGGGTA TCGGCTACTG TTTTGTTGGA
CAACTTACCC GTGAACGCAT CGCTACCGAA TCCAGTTCCC ATTTTTCTGA ACCGTTTCCC
CGAGTACATT CCGGCGGCTT TGCACCGGGA GCGGCCCGCC CACAAGGTCG TGACGAGGTC
TTGCGGACGC TTGCGTCCGA CTTGCGCAGA CATCGGCTCA TATCTATTGT AGGACCCGGA
GGCATCGGCA AGACAACAGT AGCGATTGCC CTCGCGAAGA GACTGTCCGG AGAGTTTCCT
TCGGAGATTC ACGTCGCCGA CTTGAGCGAA GTTGCTCATG GCGATACGGT AGCGCTCACA
CTGGCCCGTC TGCTTGGGTT GGGCGATCTT CACCACGTAC CCGTCACATG TATCGCCAAT
TATCTTTCCA CCAGGCGGGC GCTGATCATT CTGGATACCT GCGATTACGT CATCGACGAG
GTGACGTCGC TCACAACGCA AATCCTCGCG GTCTCATCCG CGACCTATTT TGTTTTGACA
AGTCGCGAGG CGCTACGTGT CAGATACGAA CACGTCTGCC GCCTGTCTGC GCTCGAAGTC
CCTCCGGGAT CCGAGGTGAT CTCGATCGAA CACGCGCATG CTTATCCAGC CGTGCAGGTG
TTTATTCAAC GCGCCCTGGA AGGGGGCGCC AGATTCCCGC AGACCAGAAA GAGCTATGCG
ACTATTTCGG GGATTTGCCG GGAACTCGAA GGAGTCGCGC TCGCGATCGA ACTTGCTGCG
GCGCGCGTCG CGACGTTTGG ACTGGCGGGC ACCATGATGC TGCTCGGAAC CCGCTCACGT
CTTCGATGGC AGGGATGCCG CAATGCCCCT GCGAGGCATC GGAATCTCGC CGCGTCTATT
GGATGGAGTT ACGCGCTGCT GTCGGAGCAG GAGAAGTCTG CTTTCCGCCA GTTGTCGTCG
TTTGAACAGC CCGCAACGCT CGACGCCATC CTCGCGGCGA CGACAAATGG GACAGGCGAT
CTTTCGAATG CGATAGACAT AGTAGAAGGT TTGGTTGCAA AGCACATGCT GCACATCCAG
CCCGGACCGG ACGACTTGCC TCGCTATCGG CTCCCGGCTT CGGAAAGGAT CTATGCGCGA
GAACAACTCA GTCAAGCTGC GCTCGATAAG CGGAGCATCG TCCAACTGAA CGGCGGGCAA
AGGATTTGCA TCTGA
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| Protein sequence | MNAKEDFLRF AVMVNTNRHE YGEAVSFGPF TLFPTERRLE RSGSVVQLGS RALDILIALI
QHAGQVVDRR KLMSRAWRNI VVDESNLRVN IAGLRKALGD GEDGVRYVKN VPGIGYCFVG
QLTRERIATE SSSHFSEPFP RVHSGGFAPG AARPQGRDEV LRTLASDLRR HRLISIVGPG
GIGKTTVAIA LAKRLSGEFP SEIHVADLSE VAHGDTVALT LARLLGLGDL HHVPVTCIAN
YLSTRRALII LDTCDYVIDE VTSLTTQILA VSSATYFVLT SREALRVRYE HVCRLSALEV
PPGSEVISIE HAHAYPAVQV FIQRALEGGA RFPQTRKSYA TISGICRELE GVALAIELAA
ARVATFGLAG TMMLLGTRSR LRWQGCRNAP ARHRNLAASI GWSYALLSEQ EKSAFRQLSS
FEQPATLDAI LAATTNGTGD LSNAIDIVEG LVAKHMLHIQ PGPDDLPRYR LPASERIYAR
EQLSQAALDK RSIVQLNGGQ RICI
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