| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6631 |
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| Symbol | |
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| ID | 6280222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2942301 |
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| End bp | 2943860 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617663 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_001890300 |
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| Protein GI | 187921268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG CTCTCATGAC GATGCGCGGC ATCGTCAAAG CGTTTTCCGG CGTGAAGGCG
CTCGACGGCA TCGACCTCAC GGTCGCGCCC GGCGAATGCG TGGGCCTGTG CGGTGAGAAC
GGCGCAGGCA AATCGACGTT GATGAAAGTG CTCTCCGGCG TGTATCCGTG GGGCACGTGG
GACGGCGAAA TCATCTGGGA AGGCGAGCCG CTGAAAGCCG CCAGCGTGCG CGACACCGAA
CGCGCCGGCA TCATCATCAT TCACCAGGAG TTGATGCTGG TGCCGGAGTT GTCCGTGGCG
GAGAACATCT TTCTCGGCAA TGAAATCACG CTGCCCGGCG GCCGCATGAA TTATGCCGCG
ATGTACCAGC GCGCCGACGA ACTGCTGCGC GAACTCGGTA TTAGCGGTAT TAATGCCGCG
CAGCCGGTGA TGAACTATGG CGGCGGTCAT CAACAGTTGA TCGAGATCGC GAAGGCGCTG
AACAAGCGCG CGAAGCTGCT GATTCTCGAT GAACCGTCTT CCTCGCTGAC TTCTTCCGAG
ATCCGGATTC TGCTCGACAT CGTGCGCGAT CTGAAGCGGC GCGGCGTGGC CTGCGTGTAC
ATCTCGCACA AGCTCGATGA AGTGGCGGCC GTTTGCGACA CCATCAGCGT GATTCGCGAC
GGCCGTCATG TCGCGACCGA GCCGATGCGC GCGCTTACCA CCGACCGCAT CATTTCGTTG
ATGGTGGGCC GCGAGATCAA GAACCTGTTT CCACGCGAGC CGCATCCGAT CGGCGACGTG
ATCTTCGAAG CGCGCCACGT CACTTGCTTC GACGTGACCA ATCCGCGCCG CAAGCGTGTG
AACGACGTGT CGTTCGGGCT GCGGCACGGC GAGATTCTCG GCGTGGCCGG TCTGGTCGGC
GCGGGGCGCA CGGAGTTGAT GCAGGCGATC TTCGGCGCGT ATCCCGGCGT GAGCGAGGCG
ACCGTGGTGA TGGACGGCAA GCCGCTCAAG ATTCGCGCAC CCGTCGATGC GATTCGCGCG
GGCATCGGCA TGGTGCCGGA AGATCGCAAA CGTCACGGCA TCGTGCCGGG GCTGAGCGTC
GGTCACAACA TCACGCTAGC GGTGCTGCAG CGCTTTGCGT CGGGTGGACG AATCGACTCC
GCGGCCGAAC TCGATACGAT CAATACGGAG ATGAAGCGGC TTTCGGTGCG CGCCGCGCAT
CCCATGTTGT CGATTGCGAG TCTGTCCGGC GGCAATCAGC AAAAGGCCGT GCTGACACGC
ATGCTGCTGA CCAATCCGAA AGTGCTGATT CTCGACGAGC CCACGCGCGG CGTCGACGTC
GGCGCGAAAT ACGAAATCTA CAAGCTGATC TTTCAACTGG CGCAGCGCGG CATGTCGATC
GTGATGGTGT CCTCTGAATT ACCCGAAGTG CTCGGCATCA GCGATCGCGT GCTGGTAATC
GGCGAAGGCG AGTTGCGAGG CGATTTCGTC AACGACGGCC TCACGCAGGA GGACATTCTC
AGCGCCGCGA TCCGTCCCGT GCAGCGATCC CCGAACCCAA CCGCAGCGAG TGCCGCATGA
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| Protein sequence | MTQALMTMRG IVKAFSGVKA LDGIDLTVAP GECVGLCGEN GAGKSTLMKV LSGVYPWGTW
DGEIIWEGEP LKAASVRDTE RAGIIIIHQE LMLVPELSVA ENIFLGNEIT LPGGRMNYAA
MYQRADELLR ELGISGINAA QPVMNYGGGH QQLIEIAKAL NKRAKLLILD EPSSSLTSSE
IRILLDIVRD LKRRGVACVY ISHKLDEVAA VCDTISVIRD GRHVATEPMR ALTTDRIISL
MVGREIKNLF PREPHPIGDV IFEARHVTCF DVTNPRRKRV NDVSFGLRHG EILGVAGLVG
AGRTELMQAI FGAYPGVSEA TVVMDGKPLK IRAPVDAIRA GIGMVPEDRK RHGIVPGLSV
GHNITLAVLQ RFASGGRIDS AAELDTINTE MKRLSVRAAH PMLSIASLSG GNQQKAVLTR
MLLTNPKVLI LDEPTRGVDV GAKYEIYKLI FQLAQRGMSI VMVSSELPEV LGISDRVLVI
GEGELRGDFV NDGLTQEDIL SAAIRPVQRS PNPTAASAA
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