| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6618 |
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| Symbol | |
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| ID | 6278830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2926904 |
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| End bp | 2927956 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642617650 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001890287 |
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| Protein GI | 187921255 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC AATGTGTCGT GGCTGCTTTG GGCGTAGTGC CTTGTGTAGG CGCACACGCG
CAAGCATCGG TCACGCTATA CGGTGTGATC GACACCAACC TCGAATTTCT CAACCACGCG
GGCGCGAGCG GCGGCTCGCT GGTCCGCGAG AATTCCGGTG GCCTGAGTAA TTCGCGCTTC
GGCTTTCGCG GCGCCGAAGA TCTCGGCGGC GGCAACAAAG CGTTCTTCAT TCTCGAAGCG
GGCTTCAACG GCAACGACGG CACCAATGCG AGCGCGGGCG TGTTGTTCAA CCGCACCGCG
GCAGTGGGGC TTTCGAATGC GTACGGCGCG CTGTCGGCGG GCTTGCAGTA CACGGCGATG
TACGACACGC TCATCAAATA CGACCCGATG GCGTTCGGCC AGCAGTACAC GTGGATGCCG
ACCACCGGTT CCGCCGACGG CTTTTCGTTC AAGGCGCGCG TGAACAACTC GGTCAAATAC
GTGGGCCGCT TCGGCGGTTT GACGGCGACG GCGGACTACA GCTTCGGTGG CTCGGCGGAT
TCGTTTCAGA GCAGCGCGGC CTACGGCGGT GCGCTCGATT ACAACACCGG CAGCTTTGCC
GCGGCCGTGG CCTACGACTA CCGCAACGGC GCGGTCAACG CGACAGGCAT GTGGACCAAG
TCGCGTAACT GGAGCGCCTC GGCGCGCGAG CAGCTCGGCG ACGTCACGCT CATGGGCGGC
TATGAGCATT ATTTGTTCAA CCCGACCAAG GGCAAGTCCG TGTCGTCGGC ATTATGGTTC
GGCGGCGTGC GTTATCTGGT CACACCGGCT TTCCGCCTGA CGAGCGCCGC GTACTACCAG
AGCAACAAGG CGGACAACGT GTCGAATTCG TTGATGGGCG TGCTGAGCGC GGACTATATT
CTGTCGAAGC GAACCGATGT GTATGCAACC GTCGCGTATG CCGCGTCCAT GCACTACGCC
AACGATCAGT ACACGCCCGT CGGTTTGACG AGCGACACCG CGTTCGGTCC GAACCAGATT
GGCGTGACGC TCGGCATTCG CCACCGGTTC TAG
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| Protein sequence | MKKQCVVAAL GVVPCVGAHA QASVTLYGVI DTNLEFLNHA GASGGSLVRE NSGGLSNSRF
GFRGAEDLGG GNKAFFILEA GFNGNDGTNA SAGVLFNRTA AVGLSNAYGA LSAGLQYTAM
YDTLIKYDPM AFGQQYTWMP TTGSADGFSF KARVNNSVKY VGRFGGLTAT ADYSFGGSAD
SFQSSAAYGG ALDYNTGSFA AAVAYDYRNG AVNATGMWTK SRNWSASARE QLGDVTLMGG
YEHYLFNPTK GKSVSSALWF GGVRYLVTPA FRLTSAAYYQ SNKADNVSNS LMGVLSADYI
LSKRTDVYAT VAYAASMHYA NDQYTPVGLT SDTAFGPNQI GVTLGIRHRF
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