| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6543 |
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| Symbol | |
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| ID | 6277827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2832193 |
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| End bp | 2833416 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642617574 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001890217 |
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| Protein GI | 187921185 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0438593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCCGA CTTTGACGTT CTACGTCAAC ACTCTTAGAT TGAGCACAGA GGGGCCGCTT
CGCCTCTCCG TTTTGCATAC GTCGTACGGT TCCGAAACGC AGGCCGGGTT TGAGCGCAGG
GCTGTCAAAG ACGGAGACAA TCAGCGAAAA ATCGATATGG ACAAGCGCAA AAGCACCGTA
AACCTACTTA GACGAATGGC CGCCGTCTCG ACGTTGAGCA TTCTCACAAG CATATTTGCA
GCGCAACCAA GCAGCGCACA GACCACCTTG TATCTAGCGA ACGTCGGGGG TTCGAGCGAG
CAGTTGTATC AACAGAAGGT GATTCCCGCT TTTGAGAAAG CGCACAACGT GAAAGTTGTA
TATGTCGCGG GAACATCGAG CGACACCCTC GCCAAACTTC AGGCACAGAA GGGACGTCAG
CAAATCAATG TTGCAGTGAT GGACGATGGG CCTATGTATC AGGCCATGCG CCTCGGCCTC
TGCACGAAGA TTGCTGAAGC TCCTGTATTA AATGATTTGT ACCCTTTAGC GAGAATAGGT
CCTACTGCAA TCGGCATTGG AGTTGTCGCG ACTGGAATCG GTTACAACGC AGATGCGTTC
AAGAAGGCCA ATATTCCTGC CCCAGACTCT TGGAATGTTT TCACCGAAAA ACGCCTTGAT
GGGAAGATTG CAATCCAGCC AATCACGAAC ACCTACGGCC TTCACACTCT CATAATGCTC
GCCCGCGCAA ACGGGGGAAG CGAGAACGAC ATCAATAAAG GGTTCGCCGT AATGGTCAAG
TCTGTAAGTC CAAATGTGCT TTCCTGGGCT TCGACTTCAG GAGAGTTAGA TAGCCTCATG
CAGTCGGGAG ACGTCATCCT TGCCCCCTAT GGCAGCGGGC GTGCGATGGC ACTGCGAAAG
ACCGGCTTCC CGCTAAAGCT GGTCTATCCG AAGGAGGGTG CCGTTGCCCT TCAGGCGGCG
GCCTGCGTTT TGGTGGAAAA CTCGCAACCC GAATTGTCTC AGCAATTTGT CCAGTACTTA
CTGAGCCCCG AAGTCCAGAG ATTGCAGGCG GAGAATATCG GCCTCGGACC CGTTAACAAA
ACGGTAAAAC TGAACGCAGA TGTGGCAGCA AATGTCCCTT ATGGACCGGA GCAGATTTCA
AAGCTGACCA CAGTCAATTG GGACGTCATC AACCAACATC GGACCGAGTG GACCGGCCGT
TGGAATCGTA GCGTTGAGAG ATAA
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| Protein sequence | MFPTLTFYVN TLRLSTEGPL RLSVLHTSYG SETQAGFERR AVKDGDNQRK IDMDKRKSTV
NLLRRMAAVS TLSILTSIFA AQPSSAQTTL YLANVGGSSE QLYQQKVIPA FEKAHNVKVV
YVAGTSSDTL AKLQAQKGRQ QINVAVMDDG PMYQAMRLGL CTKIAEAPVL NDLYPLARIG
PTAIGIGVVA TGIGYNADAF KKANIPAPDS WNVFTEKRLD GKIAIQPITN TYGLHTLIML
ARANGGSEND INKGFAVMVK SVSPNVLSWA STSGELDSLM QSGDVILAPY GSGRAMALRK
TGFPLKLVYP KEGAVALQAA ACVLVENSQP ELSQQFVQYL LSPEVQRLQA ENIGLGPVNK
TVKLNADVAA NVPYGPEQIS KLTTVNWDVI NQHRTEWTGR WNRSVER
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