| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6474 |
|---|
| Symbol | |
|---|
| ID | 6279673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2758173 |
|---|
| End bp | 2761295 |
|---|
| Gene Length | 3123 bp |
|---|
| Protein Length | 1040 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642617508 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001890151 |
|---|
| Protein GI | 187921119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA TCGACAAGCA GATCGCACCG CCGAAGTCAT GGGAGAAATT CGAAGATCTG
ACACGAGCAT TGTTTGCGGC TGTCTGGAAG TCGCCTTTCA CCCAAAAAAA TGGTCGGACG
GGTCAGAAGC AACATGGCGT TGATGTCTTC GGTACCCCCG AGACTGCACA CGGAAAAACG
TTTGGTGTGC AGTGCAAAGG AAAAAGCGAG GGCTACGGGG CCAAGGCAAC GATTGCCGAG
TTCGACGCTG AGCTTGCCAA GGCAGAAAAT TTCAAGCCCT CGCTTGGACA TTGGACGTTT
GCCACTACTG CACCAAACGA CGGACCTCTC CAAGAACACG CGCGGATCAT ATCGGAACAG
CGTGAAAGAG AAGGGCGATT TCCGGTCATT GCCATCGGCT GGGACACGAT TCACGCACTA
CTGTCAAGTC ACCAGGCCGT TGTCGAAGAA TTTTATCCCG AGCATGCGGG TCATTTGCCG
AAGATCATGG CGGCGCTGCA GGCGCTCCCG AGTACGGCCG AGCTCGAACG ATTTCGGCTG
AGCCTGAAGA CGTTTGTACC GTACAAATCG GCGCCGAGCG TCGACGTTTC TTCGTGGTCT
GAGGTTCGTT TCGAAACCGC CCGCGATCTA GGACCCGCGC TGATGGGGCG ACCGCTAGGC
CCCGCTGATG TAGCGGCCTG TCCAGTGCTT CCGGAGGCTG CCGTTCTGAT CGCCGACCTG
GAGCGAGCGG GTTCTGCTCG GGTCGCTGGC GTTCCGGGGG CCGGTAAGTC GATCTGCATG
CTTCAGGCTG CACGCATTGC ACGCCATCGC GGCTGGCGAG TCTTGCGACT GATTGATCCC
ATGGGAGCAA TTCCACCGTT TGTCGAGACC GGAGAACCCA CCCTCTATAT CGTCGATGAC
GCGCATCTTG CCCATCCTGC AATCCTGCGC GAGCTGGAGG AGCGCGCGAC TGCATCGCAC
TGGGTGCTTA GCGCTCACAC GACTTCCGAG GACAAGGCAA GCGCTCCGGG AACCATCCAG
CTTGATGCAA AGCGCGCGGT ACGAGTGATT GCAGACAAAC TGAGGGCGTC CCCAGACACT
ACGCTCGCGG CTGTCCGTCG TGCGGATGAC CGGGTCGGCG ATCGTTTGGG GGATGAGCGA
CTCAAGGAGC GACTCGAACA TGCAGCGGAA CAGGCGCTTT ACCCATGGCA ATTCTGCTTC
ATCCTCGGGG GCGGGTGGCG GAGGGCCAGT GCGTTGGCAA GTTCAGCCCG CGCAGCCGGA
GCCGACCTGG TACTCGCGGC TGCGGCTGTT CGTCAGCTTG GTACCCGCGA CGCCCGATGC
TCGCGCGAAA TGTTGATGAA GCTCGTTGGC GATGTTATGC CCATCGAGGA TATTGACGCC
GCAATCACGT GGTTGATCTC TCAGCGGCTT CTTCTGAATG TTGGTGACCT TCGGTGTCCG
CATCAGCGCC TAGCCAGCGT CCTGTTTAAA CGCATTCTTG AGGGGCAGTC AGCGAAAGAG
CATCAGATCG TTGCGCGTAT GCTGGAGACG GTATTTTGCG ACGAGCAGAC GCCGCTCGCA
GGACTGAGCC TTCTGCTCAG TGAATTGTCG TTCGCGGGCG ACTATGGGCG GTGGCGTTGG
CTGGTGAAAT CAGAATGGCT TGCGCCGGTC CTCATGCGCT GTTGGGCCGC AGCCACACCA
ACTGATATCC GAGATGCCTG CTGGCTGCTC TGCAATGTGC ATGGGTATCT GCCTCAAGAG
ATGGACGAGT TTGCCCGCCA TAAGAATTTG CTGGCGGATT GGATTCAGGG CGCACCCGAA
GGCGCAGGTT ATGCGATTGC CCGGGTCATT AATCATATTC ACAACACCAA TGAGGCGCTC
GGTAAGAGTA TCGTTTCGCT AGTTGACCCA GCACCGTTGG CACAAGCGAT AGGTACTGCG
GGCCCGTTAC ATGCTGGTGA GATCGCCCGT CTCATCTCTA CGATGGGTGC GGGGAACGAT
GATGCGTGGA AGGCGCGCTA TCTTGAGCAT ATCGATCGGA GCGCATGCTG GCATACGGTC
TCGAATTGGC CGCAGGACGC GTACCTGTCG GTCGTGGCCG ACATATGCGA ACACTTCTGC
CATTTCGAGC CAGAGTTTGG ATTCGCACTG ATCGAAGCTC TAGTCCCTGC TATCGCCGAT
CGGCTGCGCG CTGACCCGCA AGAATCGTTT CATGAGATCA ACGACATTGT GTGGAATGCG
TTACGACTCT ATGACCCACT CAACATTTTC GTCGGCAGGT TGGCGCCGTC ACGGCGAATG
CGGCAGGTTG GGCGCAGGAT TTGTGCTTGC TGGTCGCCGC AGGATCTTGC AGGCAAATTA
TCGCGCAGCA CGCACCGTAC CTTTCAGTCT GCCGCAGGCG TGCTCAGCTT CATGCACAAG
GCATCACCAA AGCAGTTCGA AGCGACCGTG CTGGCACTCG ATTGGGAGCT GATCGATCAG
GCGATTGGTG CTGATTGGGC GGAAGAAATC GGCGACGCAC GGATGCTGCT CGGCGTGGCA
TATACCCTGC CGGCGGCGCG CCCTGCGGTC GAAGCATTGA TCGAGCGTAA CAGGGAACGT
ATCGTCACCA TGTCGACAAT TCTTGGGGTG CTCGCTCCAG CAAGCGCACT ACGTCACGTG
GCCGCAGGCA AGCGCATTGC ACTCTGTAGT AGGTTTCATG TGGATTGGAC GCTGGCGGCT
TTAATCCTGG CTCGATTCGT CCAGTCGGAG CCATCTCTGG TTCCAGCTCT GCTCGAGCCG
CACTACGGCG GGTTGGCGGC GGCGCTGTCG CAGGAGAGTC CGACTTTCTA TAAGTATGGC
CTATTGTTTT TGCGTCTGCT CGCACAGGTC AGACCGGGAG GGCTAGCGCG CGTATTGGAC
GAGATCGATA CCGAGAAGGT TGAGCGCGGT TGGCGTAATG CACTGCGCGG GCAGGGAAAC
AATACTATGC CGGGGGCCAA GGCACAGGCG CGCCAGGTTG CCTCGTTGCT CATTCATCAT
GCGCTCGAAC GAAACGATGC ACTTGGCGAA CTGTCACGAC GATTGAGACG CGATTTCCCT
CGACAGTCTG TTCCGTTAGC GGAGACCGTT GAGCGGATCG ACATCACAAA ACTGGTCGAC
TGA
|
|---|
| Protein sequence | MDFIDKQIAP PKSWEKFEDL TRALFAAVWK SPFTQKNGRT GQKQHGVDVF GTPETAHGKT
FGVQCKGKSE GYGAKATIAE FDAELAKAEN FKPSLGHWTF ATTAPNDGPL QEHARIISEQ
REREGRFPVI AIGWDTIHAL LSSHQAVVEE FYPEHAGHLP KIMAALQALP STAELERFRL
SLKTFVPYKS APSVDVSSWS EVRFETARDL GPALMGRPLG PADVAACPVL PEAAVLIADL
ERAGSARVAG VPGAGKSICM LQAARIARHR GWRVLRLIDP MGAIPPFVET GEPTLYIVDD
AHLAHPAILR ELEERATASH WVLSAHTTSE DKASAPGTIQ LDAKRAVRVI ADKLRASPDT
TLAAVRRADD RVGDRLGDER LKERLEHAAE QALYPWQFCF ILGGGWRRAS ALASSARAAG
ADLVLAAAAV RQLGTRDARC SREMLMKLVG DVMPIEDIDA AITWLISQRL LLNVGDLRCP
HQRLASVLFK RILEGQSAKE HQIVARMLET VFCDEQTPLA GLSLLLSELS FAGDYGRWRW
LVKSEWLAPV LMRCWAAATP TDIRDACWLL CNVHGYLPQE MDEFARHKNL LADWIQGAPE
GAGYAIARVI NHIHNTNEAL GKSIVSLVDP APLAQAIGTA GPLHAGEIAR LISTMGAGND
DAWKARYLEH IDRSACWHTV SNWPQDAYLS VVADICEHFC HFEPEFGFAL IEALVPAIAD
RLRADPQESF HEINDIVWNA LRLYDPLNIF VGRLAPSRRM RQVGRRICAC WSPQDLAGKL
SRSTHRTFQS AAGVLSFMHK ASPKQFEATV LALDWELIDQ AIGADWAEEI GDARMLLGVA
YTLPAARPAV EALIERNRER IVTMSTILGV LAPASALRHV AAGKRIALCS RFHVDWTLAA
LILARFVQSE PSLVPALLEP HYGGLAAALS QESPTFYKYG LLFLRLLAQV RPGGLARVLD
EIDTEKVERG WRNALRGQGN NTMPGAKAQA RQVASLLIHH ALERNDALGE LSRRLRRDFP
RQSVPLAETV ERIDITKLVD
|
|---|
| |