| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6460 |
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| Symbol | |
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| ID | 6279905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2732352 |
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| End bp | 2732750 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642617495 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_001890138 |
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| Protein GI | 187921106 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0171538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000529343 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAACGA CTACACCACA ACGCACAATG GTTTCGCACC CCGCTTCGGA CAGCAGCGAC
TTCGAGGTGG GTCTGCGCCC ATATTTTGCC TATCGCGATC TCGGTTTGAA GGAAGCAACA
AATGGTGGAT TCGTTGCGCA CGTCATCCGT GCCGTACCAG GCAAACAAGC CGACCCGGAA
TGGCATACTC ACAACACTTC GTTTCAGATC GTGTTCGTAC TGCGCGGATG GATCGATTTC
GAATTCGAGG ACATTGGCGT GTCCCGTCTT ACCGCCGGTT CAATTTGTTA CTTCCCGTCC
GGCGTGCGCC ACCAGGTTCT CGCAAATAGC GACGATTTCG AACAGTTGGA GATCGTCTCA
CCGGCGAACT TCGAAACGCA CGACGCCGAA AAGCCATAA
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| Protein sequence | MSTTTPQRTM VSHPASDSSD FEVGLRPYFA YRDLGLKEAT NGGFVAHVIR AVPGKQADPE
WHTHNTSFQI VFVLRGWIDF EFEDIGVSRL TAGSICYFPS GVRHQVLANS DDFEQLEIVS
PANFETHDAE KP
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