| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6424 |
|---|
| Symbol | |
|---|
| ID | 6277772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2692930 |
|---|
| End bp | 2693796 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642617465 |
|---|
| Product | NmrA family protein |
|---|
| Protein accession | YP_001890108 |
|---|
| Protein GI | 187921076 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0421273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCAA TCACAGGAAT AACAGGAAAA GTTGGCGGCG CGGTAGCACG CACGCTGCTC
GCCGCAGGTC AGACGGTACG CGCCGTGGTT CGCGATCCCT CCCGGGCACA TGAATGGGCG
GAGCATGGCT GCGAAATCGT GACCGCCGAC ATGGACGACG CCGCGTCATT GACCGCCGCG
TTCAAGGGTG CGCAGGGCGT GTTCATTTTG CCGCCATCCG AGTTCGATCC GATGCCGGGC
TTTCCCGAGG CGCGCGTCGT CATCGATGCC GTCAGCACCG CGCTGCAGGC CGCGCGCCCG
GAGAAAGTCG TCTGTCTGTC GACGATTGGC GCGCAAGCTA TCGAGACCAA TCTCCTCACG
CAACGCACGC TGATGGAGCA GGCGCTTCGC GGCCTGCCGA TGCCCGTGAC ATTTCTGCGT
CCGGGCTGGT TTATGGAAAA CGCGGCATGG GACGTGGCCA CGGCGCGGGA CCAGGGGATG
ATCGCCAGCT TTCTGCAACC GCTCGACAAA GCCGTGCCGA TGGTTGCGAC CGCGGACGTT
GGCCGGGTCG CCGCGCAACT TCTCCAGCAG TCGTGGAGTG GTGTGCGTGT CGTCGAACTG
GAGGGGCCAC AGCGTGTCAC GCCCAGCGAA ATCGCCGAAA CGTTTGCGCG GATTCTTGGC
CGTGCGGTCG TCGCGGAAGT TGTCGAGCGT GACACGTGGG AACTGCTGTT CCGCTCGCAG
GGCATGAAAG AACCCATGCC GCGCATCCGC ATGCTCGATG GGTTCAACGA AGGCTGGATC
GCTTTCGAGG GCGAAGAGGC TGGCATTGTG AAGGGCGAAG TGGAACTGGA GACCGTTCTG
CGCGCGCTCG TCTCACAAGC ACAGTAA
|
|---|
| Protein sequence | MYAITGITGK VGGAVARTLL AAGQTVRAVV RDPSRAHEWA EHGCEIVTAD MDDAASLTAA
FKGAQGVFIL PPSEFDPMPG FPEARVVIDA VSTALQAARP EKVVCLSTIG AQAIETNLLT
QRTLMEQALR GLPMPVTFLR PGWFMENAAW DVATARDQGM IASFLQPLDK AVPMVATADV
GRVAAQLLQQ SWSGVRVVEL EGPQRVTPSE IAETFARILG RAVVAEVVER DTWELLFRSQ
GMKEPMPRIR MLDGFNEGWI AFEGEEAGIV KGEVELETVL RALVSQAQ
|
|---|
| |