| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6403 |
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| Symbol | |
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| ID | 6279420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2666178 |
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| End bp | 2667965 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642617445 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001890088 |
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| Protein GI | 187921056 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA ATCGAGACAG GAAGTCCCTT CGTTCGCGAG CCTGGTTTAA CAACAGCGAC
AACCCGGCTA TGACTGCGTT GTATCTCGAG CGCTTCATGA ACTACGGACT GACTCTGGAA
GAGCTGAAAA GCGAGCGTCC CGTTATCGGT ATCGCCCAGA CAGGGAGCGA CCTCTCGCCT
TGCAATCGCC ATCACGTGGA ACTGGCCCAG CGCGTTAAGG ACGGCATTCG CGACGCAGGC
GGCATTCCGA TTGAGTTCCC TGTTCATCCT ATTCAGGAGA CGGTAAGACG ACCGACGGCA
TCCCTCGACC GCAACCTTGC GTACCTTGGA CTTGTTGAGG CTTTGTACGG ATATCCATTC
GATGGTGTGG TTCTAACCAC CGGTTGCGAC AAGACGACTC CGGCGATGCT CATGGGCGCC
GCTACGGTAG ACATCCCCTC AATCGTGCTC TCTGGCGGCC CGATGCTGAA CGCCTGGTAC
AAGGGCGAAC GAGCCGGTTC CGGCACGATT ATCTGGCATG CCCGCAGCGA GCTTGCGGCA
GGCCGCATGG ATTACGACGA ATTTCTCTCC TGTGTGGCGA ACTCGGCTCC TTCCATCGGG
CACTGCAATT CGATGGGGAC GGCGCTCTCG ATGAATAGCC TCGCGGAAGT ACTGGGCATG
TCTCTCCCCG GCTGCGGGAC CATTCCCGCA CCATATCGGG AACGTGGGCA GATGGCGTAC
CAGACGGGGC GCCAGATTGT CCAACTGGTC CATGATGACG TGCGGCCTTC GTCGCTGCTC
ACTCGGGAGG CATTCGAGAA CGCCATTGTG GTCGCGAGCG CGATTGGTGC ATCAACCAAC
TGCCCTCCGC ACATTAATGC CATTGCGCGT CACATCGGCG TCGATCTCGA CATTCGCGAT
TGGGACCGGC TCGGATATGA CATTCCGCTC CTGGTCAACT GCATGCCGGC AGGCAAATAC
CTGGGCGAGG AATTCCACCG TGCAGGCGGC GTGGCGGCGG TAGTACACGA GTTGCTTAAA
GCCGGAAAAC TTCATGGGGA CGTTCAAACT GTCTCGGGTA AGACCCTTGC GCAGTGCTAT
GGCGACAGTC CTGCGACCGA CGCTGACGTT ATCAGGCCCT ATGCATCACC ATTGAAGAGC
GAAGCTGGGT TTGCTGTGCT TGGCGGCAAC CTCTTCGATT CCGCGGTAAT GAAGACGTCG
GTCATTTCGG ACGACTTCCG CCATAAATAT CTCGAGAATC CCGCTGACCC CGGTGCCTTC
GAGGGGAGAG CCATCGTGTT TGAAGGGCCG GAGGATTACC ACGACCGGAT TGACGACCCC
GCACTGGAAA TTGATGAAAA CTGCATCCTC TTTATTCGTG GCACGGGGCC AGTCGGCTAT
CCAGGCGCGG CGGAAGTGGT GAACATGATT CCCCCCTCTG AACTTATCAA GCGAGGCGTG
ACGCTGCTCC CATGTGTGGG AGACGGAAGG CAGTCGGGCA CTTCCGCGAG TCCGTCCATT
TTGAATGCGT CTCCCGAGTC GGCAATTGGC GGCGGCCTGG CCATCCTGCA GACGGGCGAC
CGCGTTCGCT TCGATCTGAC ACGCCGGCGT GCTGACATGC TGGTGCCGGA AGACGAGCTA
GACCGGCGCC GTCGGGAATG GAAAGCATAT GAGTTCGTCA ATCAAACGCC GTGGCAGGAA
CTGCATCGCC GCTATGTAGG GCAGCTCGAA GACGGCGCCT GCCTGGATTT CTCGGTGAAG
TACCAGCGCG TTGCAGAAGT GCATGGAGTT CCGAGAGATA ACCACTGA
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| Protein sequence | MSKNRDRKSL RSRAWFNNSD NPAMTALYLE RFMNYGLTLE ELKSERPVIG IAQTGSDLSP
CNRHHVELAQ RVKDGIRDAG GIPIEFPVHP IQETVRRPTA SLDRNLAYLG LVEALYGYPF
DGVVLTTGCD KTTPAMLMGA ATVDIPSIVL SGGPMLNAWY KGERAGSGTI IWHARSELAA
GRMDYDEFLS CVANSAPSIG HCNSMGTALS MNSLAEVLGM SLPGCGTIPA PYRERGQMAY
QTGRQIVQLV HDDVRPSSLL TREAFENAIV VASAIGASTN CPPHINAIAR HIGVDLDIRD
WDRLGYDIPL LVNCMPAGKY LGEEFHRAGG VAAVVHELLK AGKLHGDVQT VSGKTLAQCY
GDSPATDADV IRPYASPLKS EAGFAVLGGN LFDSAVMKTS VISDDFRHKY LENPADPGAF
EGRAIVFEGP EDYHDRIDDP ALEIDENCIL FIRGTGPVGY PGAAEVVNMI PPSELIKRGV
TLLPCVGDGR QSGTSASPSI LNASPESAIG GGLAILQTGD RVRFDLTRRR ADMLVPEDEL
DRRRREWKAY EFVNQTPWQE LHRRYVGQLE DGACLDFSVK YQRVAEVHGV PRDNH
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