Gene Bphyt_6400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6400 
Symbol 
ID6279233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2662951 
End bp2663844 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content59% 
IMG OID642617442 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_001890085 
Protein GI187921053 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAAT TGGAATCACC ACGCGTTGGA TTTTGTGGTC TTGGGAAGAT GGGCTTGCCG 
ATGACGCAAC GTTTGCTCAA TAGCGGACGG CAGGTTGCGG TGTGGAACCG TTCCATGCAG
AAAGCGCAAG CGCTGGAAAC CGCGCAGCCG GGGCAATGCA AAGCCTTTGC GTCGCCGGCA
GAGCTCGCTG GGCAAGCTAA TGTCGTGATG TTGTGCCTCG CGGATAGTCA TGCTGTTGAA
AAGGTCGTAT TCGGAACGGA CGGGCTTGTC GAAGGCGCCG GCAAGAATGG CATTGTTCTG
GTGGACCATT CCACCATTAC ACCGGCGCAG ACGCGTTCGT TTGCGGCGCG ATGGCAGGAG
ACTACTGGGG GGCACTGGGT CGACGCGCCA GTATCTGGCG GCACGGCGGG CGCTATAGCG
GGTACGCTTG CTGTAACGGC AGGGGGGCAC GCGACTTTAG TCAACTACGT GGCGCCGCTT
ATGGTGGCTT ACTCAGCTAA CCTGACGCAC ATGGGTGAGT TGGGCGCCGG CCAGGCAACA
AAGCTTGCTA ACCAGGTTAT CGTCATGACA ACCATTGCTG CTATTGCCGA GGCAACCCGG
CTTGCAGAGC ATGCGGGCGT CGATGCGGTT CGCCTACCCG CGGCACTTGC GGGAGGCTGG
GCCGATTCCA TCCTGCTGCA AACTTTGCAG CCACGCATGG TTGTTCCGCC AGAGACGCCT
TCTGGATCTA TCCGAACGAT GTTGAAAGAC CTTAATGCCG TGGAGTCGCT CGCGTGCGAA
AGCGGGGTAG CGCTGCCGAT TGCCCGCCGC GTGCAGGAAT GGCTCCAGAA AGCCATTGAT
GAGGGTCTTG GCGGCTCTGA TATTTCCCAG ATTGTGAAGG TGAAAATGAC TTGA
 
Protein sequence
MWELESPRVG FCGLGKMGLP MTQRLLNSGR QVAVWNRSMQ KAQALETAQP GQCKAFASPA 
ELAGQANVVM LCLADSHAVE KVVFGTDGLV EGAGKNGIVL VDHSTITPAQ TRSFAARWQE
TTGGHWVDAP VSGGTAGAIA GTLAVTAGGH ATLVNYVAPL MVAYSANLTH MGELGAGQAT
KLANQVIVMT TIAAIAEATR LAEHAGVDAV RLPAALAGGW ADSILLQTLQ PRMVVPPETP
SGSIRTMLKD LNAVESLACE SGVALPIARR VQEWLQKAID EGLGGSDISQ IVKVKMT