Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6394 |
Symbol | glcF |
ID | 6279820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2656720 |
End bp | 2657949 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642617438 |
Product | glycolate oxidase iron-sulfur subunit |
Protein accession | YP_001890081 |
Protein GI | 187921049 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCA ATCTCAGCGA CGCCGCCAAA ACCCTGTCCC GCGCCGACGA AGCCGAGCAG ATCCTGCGCT CGTGCGTGCA TTGCGGCTTC TGCAACGCGA CCTGTCCGAC CTATCAGTTG CTCGGCAACG AGCTCGATGG CCCGCGCGGC CGCATCTATC TGATCAAACA GATGCTGGAA GGCGAGCCGG TCACGCAGAA GACCCAGATG CACCTTGACC GCTGCCTGAG CTGCCGCAAC TGCGAGACCA CCTGTCCGTC GGGTGTCACC TACCATGCCC TGCTGGATAT CGGCCGTGCC GAACTGGAGC GGCGGATTGT CCGGCCCGCA CTGGAACGCC TGCAGCGTGA GAGTTTGCGC CATGTGATCC CACATCGGGC GGTGTTCGGC GCACTGCTTA AGACGGGCCA GGCTATGCGG CCGTTTCTTC CGACGGCGCT TGGACGAAAA ATCCCTGGGC GAAGCGCTCG GGCAAAGACA AGACCGGAAC CGCGGCATTC TCGCAAAATG CTGATGCTGG AAGGCTGCGT GCAACGCGCG CTATCGCCGA ACACCAACGC GGCTGCCGCG CGCGTGCTCG ACCGGCTCGG CATCAGTATC GTGAATGCCG AGCGGGCAGA CTGTTGCGGC GCGACCGATT ATCACCTGAA TGCCCAGGAG GCCGGTCTTG CGCGGGCACG GCGAAATATC GACGCGTGGT GGCCGGCTAT TCAGGCCGGC GCTGAAGCGA TAGTACAAAC CGCGAGCGGC TGCGGCGCGT TCGTCAAGGA ATATGGGCAT CTGCTGCGCG ACGACCTTCG CTATGCGTCA AAAGCGCAGC GGGTCAGCGA ACTGGCGCGA GACATCGTGG AGGTATTGGC TAATGAGCCG ATCCAGCCGA TACAGACGAA CCTGTCAGGA ACGCCCCAGC AGAAAATCGC GTTCCACTGC CCATGCACGT TGCAGCACGC GCAGAAGCTG GGCGGCGCGG TCGAAGCGGT CCTGCAACGG CTCGGCTTCG ATCTGAGTGC CGTGCCCGAC GCGCATCTGT GCTGCGGCTC GGCGGGCACG TATTCGATTA CCCAGCCGGA GCTTGCGAAG AAGTTGCGCA GCAACAAGCT CGATGCGCTG GAAAGCGGCA AGCCGGACCT GATCGTCACA GCGAACATCG GTTGCCAGAC GCATCTGGAC GGCGCCGGGC GCACTCCGGT GCGCCATTGG ATAGAACTTG TAGAAGCATC CTTACCTTAA
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Protein sequence | MQTNLSDAAK TLSRADEAEQ ILRSCVHCGF CNATCPTYQL LGNELDGPRG RIYLIKQMLE GEPVTQKTQM HLDRCLSCRN CETTCPSGVT YHALLDIGRA ELERRIVRPA LERLQRESLR HVIPHRAVFG ALLKTGQAMR PFLPTALGRK IPGRSARAKT RPEPRHSRKM LMLEGCVQRA LSPNTNAAAA RVLDRLGISI VNAERADCCG ATDYHLNAQE AGLARARRNI DAWWPAIQAG AEAIVQTASG CGAFVKEYGH LLRDDLRYAS KAQRVSELAR DIVEVLANEP IQPIQTNLSG TPQQKIAFHC PCTLQHAQKL GGAVEAVLQR LGFDLSAVPD AHLCCGSAGT YSITQPELAK KLRSNKLDAL ESGKPDLIVT ANIGCQTHLD GAGRTPVRHW IELVEASLP
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