Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6213 |
Symbol | |
ID | 6277665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2464699 |
End bp | 2465451 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642617268 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001889911 |
Protein GI | 187920879 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.681142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAG AAGTTAGCGG CGTCGCGGTC GTCACCGGAG CGGCGCGCAA TATCGGCCGC GAGATCGCGT TGCAACTTGC GGCAGCGGGC AATGCAGTGC TCGTCAACGC ACGCAGTTCC GCCGACGAAG CCGCCGAAGT CGTGCGCGCG ATCGAGGCTG CGGGCGGCCG CGCGGCCGCG CATCTGGCCG ACGTCAGCGA ACCGGCGGGC GCGCAAAGTC TCATGGAAGC GGCGATTCAC CATTTCGGGC AGATCGACAT TCTCGTCAAC AACGCCGCGG TGCGTCGCGA AGTGCCGTTC GCGGAACTGG ATTACGCGCG CTGGCGCGAA GTGATGTCGG TGATTCTCGA CGGCGCGTAT CTGTGCGCGC ACGCGGCCTT GCCGTATCTG CGGCAATCGA AGGCCGGCGC GATCGTCAAC ATCGGCGGCA TGTCCGCGCA TGCCGGTTCG GCGGGGCGCG CGCACGTGAT CGCCGCGAAA GCGGGCCTCG TCGGTTTGAC GCGCGCGCTG GCCCACGATC TCGGCCCGGA CGGCATTACG GTCAATTGCG TGGTGCCCGG CCTGATCGCG ACGGTGCGCG GTGGCGCGGC AGGCAACAAG GAACCCGCGC ATCACGCTGA GCGCACCACC TTGCTCGGCC GGCGCGGCCA GCCCGACGAG GTCGCGAGCC TCGTGCAGTT TCTGTGCGGC CCGACGGCAC GGTATCTGAC GGGCCAGGCG ATTCATGCGA ACGGCGGCGC GTTTCTAGGC TGA
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Protein sequence | MNGEVSGVAV VTGAARNIGR EIALQLAAAG NAVLVNARSS ADEAAEVVRA IEAAGGRAAA HLADVSEPAG AQSLMEAAIH HFGQIDILVN NAAVRREVPF AELDYARWRE VMSVILDGAY LCAHAALPYL RQSKAGAIVN IGGMSAHAGS AGRAHVIAAK AGLVGLTRAL AHDLGPDGIT VNCVVPGLIA TVRGGAAGNK EPAHHAERTT LLGRRGQPDE VASLVQFLCG PTARYLTGQA IHANGGAFLG
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