| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6140 |
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| Symbol | |
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| ID | 6278974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2387530 |
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| End bp | 2388294 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642617197 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001889840 |
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| Protein GI | 187920808 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.601598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAGT CACGTCTTCT CGACGGCAAG GTCGCCGTCA TTTCCGGCGG CGCGTCGCCG
CGCGGCATCG GCATGGCCAC CGCGCGCAAA TTCGCCGCTC ACGGCGCGCG CATCGCCATT
TTCGATCTCG ACGAAAAGGC CGCGGTGGAA GCCGCCGCGT CGATCGGACC CGAGCATCGC
GGTTATGTGT GCAATGTCAC CGACCGCGGC GCATGCCAGG CGGCTGTGGA GCGCACCGTC
GCCGATTTCG GTTCGATCGA TATCCTGATC AATAACGCCG GCATCACCCA GGCGGCCAAA
TTCCTCGACA TCGACCCGGA AAGCTGGGAC CGCATTCTCG ACGTCAATCT GCGCGGCGTG
CTGTATCTGT CGCAAGCAGT CGTGCCGCAA ATGAAGAAGC AGAAGAGCGG GTCGATTGGC
TGCATGTCGT CGGTGTCGGC GCAGCGCGGC GGCGGCATTC TGGGCGGCCC GCACTATTCG
GCGGCCAAAG CCGGTGTGCT CGGTCTCGCC AAAGCAATGG CGCGCGAACT CGGCAACGAC
GGCATTCGCG TGAACTGCGT GACGCCGGGG CTGATCCAGA CCGACATCAA CGCCGGCAAG
ATCAGCGACG ACAAGCGCGT CGAGATTCTT TCAGGCATTC CGCTGAATCG CCTGGGCGTG
CCCGACGATG TGGCCGGCGC GTTCCTGTTC CTTGCGTCGG ACCTGTCCTC GTACATTACC
GGCGCGGTGA TCGACGTGAA TGGCGGCATG CTGATTCACG GCTGA
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| Protein sequence | MSESRLLDGK VAVISGGASP RGIGMATARK FAAHGARIAI FDLDEKAAVE AAASIGPEHR
GYVCNVTDRG ACQAAVERTV ADFGSIDILI NNAGITQAAK FLDIDPESWD RILDVNLRGV
LYLSQAVVPQ MKKQKSGSIG CMSSVSAQRG GGILGGPHYS AAKAGVLGLA KAMARELGND
GIRVNCVTPG LIQTDINAGK ISDDKRVEIL SGIPLNRLGV PDDVAGAFLF LASDLSSYIT
GAVIDVNGGM LIHG
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