| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6127 |
|---|
| Symbol | |
|---|
| ID | 6278632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2370616 |
|---|
| End bp | 2372145 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642617184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001889827 |
|---|
| Protein GI | 187920795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACGT TGCGAACCTC GCAGACCTTG CAAGCGTTGC AGTCGCGCGA GCGCTCGCGC
CGGCGCCTGG CGCTGCGCGC GGCCCGCGCG CTGTTGATCA GCACGGGGCT GGCGGCCGCG
CTGCCGGCGT CGGCGGCGGA CACCGCGCTC GGCGGTGCGG ACGATACCAG CACGACCAGT
ACGCCCAGCA CGGCGGCAAC GGCGGCAAGC ACCTCATGCG CGCGTCCGGC TGTCATGTTT
AACCGCTGGC AGGAAAACTG GTCGGCGCTC GCCAATCCGT GCGTGCCGAA GAAGCCCTTC
GACTCGCTGA AATACATTCC GCTGTTCGGC AATCCCGACG CGTATATTTC GCTCGGCATG
GTGCTGCGCG AGCGGCTCGA AATGAACGAC GCGCCGCTCT TCGGCCTCGG TTCGGGCCGC
GACGACACCT ACGTGCTGCA ACGTCTCGAA GTTCACGCGG ATGTGCGTCT CGGCCCGCAC
GTGCAGATCT TCACGCAGTT CGAGGACGCC CGGCCTTTCG GCAAGGACAA CGTCTCGCCG
GTCGACAAGA ATCCGCTCGA CTTGCGGCAG GCGTTCGTCG CCATCACCGA ACCGCTCGGA
CCGGGTACGT TCAAGTTTCG CGTCGGCCGC CAGGAGATGG CGTTCGACTT GCAGCGGTTC
ATTTCCGTAC GTGACGGCCC GAACGTGCGC CAGGCCTTCG ACGCCGTCTG GGCCGACTAT
GAAACTGGCC CATGGCGCTG GATCGCTTAT GCGACGCAGC CGGTGCAGTA CCGCGACAAC
TCGGATTTCG ACGACGTTTC CAATCGCGAC CTGACCTTCA GCGGCGTGCG GGTCGAGCGC
AAGGCAGTCG GTCCGGGCGA TCTGTCCGCC TATTACTCGC GCTACAACCG CAGCAACGCG
CGCTTTCTCG ATGCTACCGG CAACGAGCAT CGCGACGTGT TCGACGCGCG TTACGCCGGC
TCGGTCAATC ACATCGACTG GGACGCGGAG GCGATGTATC AGTCGGGCCA TGTCGGCAAC
AAGACGATCG GTGCGTGGGC GGTGGGCACG CTCGCCGGCT ACACGCTGGC TTCGCTGCCG
TGGACGCCGC GTCTCGGCCT GCAGGTCGAT GCGGCCTCGG GCGACACGCA TCCGGGAGAT
GGCCGCATCG GCACCTTCAA TCCGCTCTTT CCGAACGGCT ACTACTTCGC GCTCGCCGGT
TATACCGGCT ACTCGAACGT GATTCACGTC AAGCCGTCGC TGATCGTCAA ACCGAACAGC
AAGCTGTCGC TGCTCGCGGG CGTGGGGCTG CAATGGCGCG AGACCACTGC CGACGCGGTA
TATCAGCAGG GCTCGGCAGT CGTGCCGGGA ACGGCGGGAC ACGGCAGCCG CTGGACCGGC
TTCTATACGC AGCTGCGCGC CGACTATGCG GTCACCGCGA ATCTCGCCGC CGCGCTCGAA
GCCGTGCATT TTCAGGTCGG ACCGTCGCTG CGCGATCTCG GTGCGCGCAA TTCCGACTAT
GTAGGCGCCG AACTCAAGTT CGGCTGGTAA
|
|---|
| Protein sequence | MRTLRTSQTL QALQSRERSR RRLALRAARA LLISTGLAAA LPASAADTAL GGADDTSTTS
TPSTAATAAS TSCARPAVMF NRWQENWSAL ANPCVPKKPF DSLKYIPLFG NPDAYISLGM
VLRERLEMND APLFGLGSGR DDTYVLQRLE VHADVRLGPH VQIFTQFEDA RPFGKDNVSP
VDKNPLDLRQ AFVAITEPLG PGTFKFRVGR QEMAFDLQRF ISVRDGPNVR QAFDAVWADY
ETGPWRWIAY ATQPVQYRDN SDFDDVSNRD LTFSGVRVER KAVGPGDLSA YYSRYNRSNA
RFLDATGNEH RDVFDARYAG SVNHIDWDAE AMYQSGHVGN KTIGAWAVGT LAGYTLASLP
WTPRLGLQVD AASGDTHPGD GRIGTFNPLF PNGYYFALAG YTGYSNVIHV KPSLIVKPNS
KLSLLAGVGL QWRETTADAV YQQGSAVVPG TAGHGSRWTG FYTQLRADYA VTANLAAALE
AVHFQVGPSL RDLGARNSDY VGAELKFGW
|
|---|
| |