Gene Bphyt_6112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6112 
Symbol 
ID6279732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2354390 
End bp2354950 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID642617169 
Product4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 
Protein accessionYP_001889812 
Protein GI187920780 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID[TIGR02296] 4-hydroxyphenylacetate 3-monooxygenase, reductase component 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.980333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG AAAAGGAAAA GACCGTGACG ATCGAAGACA CCAGAAAGCG TTTCCGCGAT 
GCCATGGCGT GCCTGCCGGC CGCCGTCAAC ATCATCACCA CGGACGGACC CGGCGGCCGC
TGCGGCATGA CTGCAAGCGC GGTGTGCTCG GTGACGGACG CACCGCCGAC CATGCTCGTC
TGTATCAATC AGACCAGCTA CGTGCATGAC ATCCTGCATC GCAACCGCAG CGTATGCATC
AACGTGCTGG CCGCCGAGTG CCAGGAAGTG GCGCGTGATT TCGCCGGCAT GACAGCGTGC
CCGATGGACG AACGTTTCGC ACGCCACGCG TGGACCGGCG GCGCGTTGTC GGCGCCGGTG
CTCGCGGATG CGATCGCGAG TCTCGAAGGC GAGATCGTCG ACATCAAGAC GGTCGGCTCG
CACTCGGTCA TGTTTGCGCA GATTCGCCAC ATCGCGTTGC GCTCGGATGG CGACGGGCTC
ATCTATTTCG GCCGCCAGTT TCATCGGCTG ACACGGCCGC AGGCAGCGGC GCCGCTGGTT
GCCGCGCAAT GCGCGAGGTG A
 
Protein sequence
MQKEKEKTVT IEDTRKRFRD AMACLPAAVN IITTDGPGGR CGMTASAVCS VTDAPPTMLV 
CINQTSYVHD ILHRNRSVCI NVLAAECQEV ARDFAGMTAC PMDERFARHA WTGGALSAPV
LADAIASLEG EIVDIKTVGS HSVMFAQIRH IALRSDGDGL IYFGRQFHRL TRPQAAAPLV
AAQCAR