Gene Bphyt_5882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5882 
Symbol 
ID6278868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2099181 
End bp2100038 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID642616945 
Productprotein of unknown function RIO1 
Protein accessionYP_001889588 
Protein GI187920556 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms 
COG ID[COG1718] Serine/threonine protein kinase involved in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC CGAAACGTCT GCTCCCGCTG GTCGAAGAAG GCTTGATCGA CGAAGTCATC 
AGCCAATTGA TGAGCGGCAA GGAAGCCACC GTCTACGTGG TGCGCAGCGG CGACGCCACG
CGCTGCGCGA AGGTCTACAA GGACGCCAAG CAGCGCAGCT TCCGCCAGGC CGCTTCGTAC
CGCGAAGGCC GCAAGGTCAA GAACAGCCGC CAGCAACGCG CGATGGAAAA AGGCAGCCGC
TATGGCCGTG AAGTGCAGGA ACAGGCCTGG CAGAACGCCG AAGTCGACGC GCTCTTCCAG
CTCGCGAACG CGGGCGTACG CGTGCCGCAG CCTTTCATCT GCACCGACGG CGTATTGCTG
ATGGAGTTGG TGACCGACGC CGACGGCAAT GTCGCGCCGC GTCTGAACGA TGTCGAGATG
ACGGAAGAAC GCGCGCTCGA ACTGCATGCG CGGCTGGTGA ACGAGGTGGT GCGCATGCTG
TGCGCCGGCA TGATTCACGG CGACCTGTCC GAATACAACA TCCTGCTTGC CGCGGACGGC
CCGGTCATCA TCGACCTGCC GCAGGCCGTG GATGCCGCCG GCAATCTCGA AGCGCCCGCC
ATGCTCGAGC GCGACGTCAA CAACCTCGCC ACGTATTTCG GCCGCTTCGC GCCAACGTTA
CTGGAGACCA GTTACGGCAA GGAAATCTGG TCGCTGTACG AAGCGGGCGC ATTGCATGTC
GACGCCGCGT TGACCGGCCG CGTCGCCTTG GATACCACGC CGATCGATCT CGAAGCCGTG
CTTCAGGAAC TCGAAGATAC GCGTCTCGAC GAAGAAGCGC GCCTGCGCTA TGAGCAGTCG
CTGCGCAGCG GCACCTAA
 
Protein sequence
MKTPKRLLPL VEEGLIDEVI SQLMSGKEAT VYVVRSGDAT RCAKVYKDAK QRSFRQAASY 
REGRKVKNSR QQRAMEKGSR YGREVQEQAW QNAEVDALFQ LANAGVRVPQ PFICTDGVLL
MELVTDADGN VAPRLNDVEM TEERALELHA RLVNEVVRML CAGMIHGDLS EYNILLAADG
PVIIDLPQAV DAAGNLEAPA MLERDVNNLA TYFGRFAPTL LETSYGKEIW SLYEAGALHV
DAALTGRVAL DTTPIDLEAV LQELEDTRLD EEARLRYEQS LRSGT