Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5826 |
Symbol | |
ID | 6278246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2029519 |
End bp | 2030976 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616890 |
Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
Protein accession | YP_001889533 |
Protein GI | 187920501 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.26319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.439131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCG AACATCTGAT CAACGGCAAA GCGAGCGCGG CGAAAGACTA CTTCGAAACA GTCAATCCGG CCACGCAAGA AGTCCTCGCC GAAGTCGCGC GCGGCGGTGC GGAAGAAGTC GACGCCGCCG TGCGCGCCGC CAAAGACGCC TTTCCCGCGT GGGCCGCCAA GCCCGCCGCG GAACGCGCGA AGCTGGTGCG CAAGCTCGGC GAACTGATCG CGAAGAACGT GCCCGATATC TCCGAGACCG AAACGAAAGA CACCGGCCAG ACGATCTCGC AAACGCGCAA GCAACTCGTG CCGCGCGCCG CCGACAACTT CAGCTACTTC GCCGAGATGT GCACGCGCGT CGACGGCCAT ACGTATCCGA CCGATACGCA TCTGAACTAC ACGCTGTTCC ATCCGGTCGG CGTGTGCGCG CTGATCTCGC CATGGAACGT GCCGTTCATG ACGGCCACCT GGAAAGTCGC GCCCTGTCTC GCGTTCGGCA ATACCGCTGT CCTGAAGATG AGCGAGCTCT CGCCGCTCAC CGCCTCGATG CTCGGCAACC TCGCGCTCGA AGCCGGCATC CCGGCCGGCG TGCTGAACGT GGTGCACGGT TTCGGCAAGG ACACCGGCGA GCCGCTGGTC GCGCATCCGG ACGTGCATGC CGTATCGTTC ACGGGCTCGA CCGCAACCGG CAACCGCATC GTGCAAACCG CGGGATTGAA GAAGTTTTCG ATGGAACTCG GCGGCAAGTC GCCCTTCGTG ATTTTCGACG ACGCCGATTT CGAACGCGCA CTCGACGCCG CCGTATTCAT GATCTTCTCG AACAACGGCG AACGCTGCAC GGCGGGCTCG CGCATTCTCG TGCAGCGCTC TATTTACGCA CGCTTTGCCG AACGTTTCAT TGAGCGCGCA AAGCGTTTGA CAGTGGGCGA TCCGCTGGCC GACAGCACCA TTGTCGGCCC CATGATCAGT CAGGGCCATC TGGCGAAGGT GCGCAGCTAT ATCGAACTCG GCCCGAAAGA AGGAGCGACG CTCGCGTGCG GCGGCCTCGA CATGCCGGAG TTGCCCGACG CCATGCGCAA AGGCAACTTC GTTCAACCAA CTGTATTCGT CGATGTGGAC AACCGCATGC GCATCGCGCA GGAAGAGATC TTCGGCCCGG TCGCCTGCCT GATTCCCTTC GACGACGAAG CCGACGCGAT CAAACTCGCC AACGACATCT CTTACGGACT GTCGAGCTAT ATCTGGACCG AGAACACGGG TCGTGCGTTA CGTGTCGCCG CCGCCGTCGA AGCCGGCATG TGCTTCGTCA ACAGCCAGAA CGTGCGCGAC TTGCGCCAGC CGTTCGGCGG CACCAAGGCA TCGGGCGTGG GCCGCGAAGG CGGCACGTGG AGCTATGAAG TGTTTCTCGA ACCGAAGAAT GTTTGCGTGT CGCTGGGCTC GCATCACATT CCGCGCTGGG GCGCTTGA
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Protein sequence | MRIEHLINGK ASAAKDYFET VNPATQEVLA EVARGGAEEV DAAVRAAKDA FPAWAAKPAA ERAKLVRKLG ELIAKNVPDI SETETKDTGQ TISQTRKQLV PRAADNFSYF AEMCTRVDGH TYPTDTHLNY TLFHPVGVCA LISPWNVPFM TATWKVAPCL AFGNTAVLKM SELSPLTASM LGNLALEAGI PAGVLNVVHG FGKDTGEPLV AHPDVHAVSF TGSTATGNRI VQTAGLKKFS MELGGKSPFV IFDDADFERA LDAAVFMIFS NNGERCTAGS RILVQRSIYA RFAERFIERA KRLTVGDPLA DSTIVGPMIS QGHLAKVRSY IELGPKEGAT LACGGLDMPE LPDAMRKGNF VQPTVFVDVD NRMRIAQEEI FGPVACLIPF DDEADAIKLA NDISYGLSSY IWTENTGRAL RVAAAVEAGM CFVNSQNVRD LRQPFGGTKA SGVGREGGTW SYEVFLEPKN VCVSLGSHHI PRWGA
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