| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5815 |
|---|
| Symbol | |
|---|
| ID | 6278448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2018839 |
|---|
| End bp | 2019795 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642616879 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001889522 |
|---|
| Protein GI | 187920490 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.416763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC AGAATGCGCT CACAGCCAGC AATGAGTCTT TCCTGCGCGA TCTGCAGTTG
TTCTGCAACA TCGCGCGCCG GGGCAGCTTC GTGGCGGCAT CGACGGAAAT GGGTTTGTCG
CCCTCGCATG TCAGCAAACG CATCGCCATG CTGGAAGTCA GTCTCGGCGT GAAGCTCTTT
CAGCGCACCA CGCGGCGGGT CAGGGTGACG AGCGACGGCG AAGCCGCTTT GCAGTGGGCG
CAAAAAATAC TCGACGACGT GCAGGGCATG GCCGATGCGT TCGCCGATCG CCGCACCGAA
TTGCGCGGCT TGCTGCGCAT CAGCACCAGC CTGAGGCTCG GACGCAAGCA CGTGTCGCCG
ATTCTGGCCT TGCTGCGCCA GCGTCATCCG AATCTCGAGA TCTGGCTGGA ATTGCTGGAC
CGGCGCGCCG ATCTGGTCGG CGAGAACTTC GATATCGACG TTCGCGTGGG CGAGGTGCAT
GAGCCGCACC TGATCGCGCA CAAGATGGTG GAGAGCGCGC GGATACTCTG CGCGTCGCCG
GAGTATCTGG AGCGGCGCGG CCTGCCGCGC GAACTGGCGG AGCTGGCCCA GCACGACTGC
CTGCTGTTTC GCGGACGCGA CGACCGCTTC GGCGTCTGGC GCCTGAGCGG TCCGGACGGC
GAAAAAAGCG TGAAGGTGAC GGGCACCGTC GCGTCCAACC TCAGCGATAT CGTCGTGCAG
TGGGCGAGAG ACGGCTACGG CGTGGTGATG GTTTCGATCT GGGACGTAGC CGAGAGCCTG
CGCGCCGGCG AACTGGTGCG CGTGCTGCCT GAATACATGC AGTCCGCCGA CGTGTGGGCG
GTGACTGCGG AGCGTCTCTC GTCGTCGGCG AAGATCCAGG TGTGCATTGA ATTTCTTCGG
GAACAGTTGA CGAGCGGCCC GTATGCGCTG GTGACGCGTG GCGTGGGCGG CTTTTGA
|
|---|
| Protein sequence | MENQNALTAS NESFLRDLQL FCNIARRGSF VAASTEMGLS PSHVSKRIAM LEVSLGVKLF
QRTTRRVRVT SDGEAALQWA QKILDDVQGM ADAFADRRTE LRGLLRISTS LRLGRKHVSP
ILALLRQRHP NLEIWLELLD RRADLVGENF DIDVRVGEVH EPHLIAHKMV ESARILCASP
EYLERRGLPR ELAELAQHDC LLFRGRDDRF GVWRLSGPDG EKSVKVTGTV ASNLSDIVVQ
WARDGYGVVM VSIWDVAESL RAGELVRVLP EYMQSADVWA VTAERLSSSA KIQVCIEFLR
EQLTSGPYAL VTRGVGGF
|
|---|
| |