Gene Bphyt_5802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5802 
Symbol 
ID6279806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2006663 
End bp2007847 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content60% 
IMG OID642616866 
Producthypothetical protein 
Protein accessionYP_001889509 
Protein GI187920477 
COG category[R] General function prediction only 
COG ID[COG3970] Fumarylacetoacetate (FAA) hydrolase family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.220072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.358251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAT ATTCCAGCTA TCTGCCTGAC GATCTCGACG GTGCCCTGCT CGTTGGCCGC 
GTGTGGCGTC AAACGAACAG CGGCGCGGGA CCGTGTGTCG TCGCTGTTCG TGGCGGCGAA
GTATTCGATA TCTCTCGCCT CGCACCAACT GTGTCCGATC TTTTCGATCG CCAGGATCTG
GTCGAACTCG TCAGGCAGGC TGCCGGCGAA TCTCTGGGTT ATGTCGACGA TCTGATCGAA
ACCACCGTCG CTGCGCAACG GAAAGAGGAT CAGCCCTACC TGCTGGCTCC CTGCGATCTG
CAAGCCATCA AAGCCTGTGG CGTGACGTTT GCGGTGAGCC TTCTCGAACG CGTCATTGAA
GAGCAGGCAG GCGGCGACCC TGCGAAGGCT GAGGAAGTAC GCGCTGCGAT CACGCGTCTG
ATCGGCACCG ATCTGTCGAA GATCAAGCCC GGCTCAGAAG CTGCCGTCAA GCTCAAGGAA
GAACTGCAGC GACGCGGTGC ATGGTCGCAG TACATGGAAG TCGGAATCGG CCCCGATGCA
GAGGTATTTT CAAAGGCGCA GCCTATGTCT TCGGTCGGAC TCGGTGCCGA TATCGGCTTG
CTGCCTGCTT CAAAGTGGAA TAACCCTGAG CCGGAGATCG TCCTCGCAGT CAACAGCAAA
GGCGAGGTGG TGGGTGCCAC ACTCGGTAAC GACGTCAATC TGCGCGACAT CGAAGGCCGT
TCCGCGCTGC TGCTGGGCAA GTGCAAGGAC AACAACGGCT CGTGCGCGAT CGGTCCGTTT
ATCCGCCTGT TCGACGGACG GTTCACGCTG GACACGATCC GAGCAACAAG TGTTTCGTTG
CGCGTGGAAG GTACCGACGA CGGCTTCGTG CTCGAAGGCG TCAGCCATAT GCAAGAGATC
AGCCGTGACC CTATTGACCT GGTGAGTCAG ACCTGGGGCA AGCACCATCA ATATCCCGAT
GGCTTCATGT TGTTCCTCGG CACGATGTTC TCTCCGATCA AGGATCGCGA TGCGCCGGGT
GGTGGCTTTA CGCATCACCT CGGCGACCGC GTGACGATCA GCGCCCCTCC GCTTGGCGCG
CTCGTCAACA CCGTGCGACT GTCGACCGAG ATCGCTCCGT GGACATTCGG CGTGCGTGCG
CTGTACGCCA ATCTCGCCGA GCGCTCGCTT CTGAACCTCG GTTGA
 
Protein sequence
MTSYSSYLPD DLDGALLVGR VWRQTNSGAG PCVVAVRGGE VFDISRLAPT VSDLFDRQDL 
VELVRQAAGE SLGYVDDLIE TTVAAQRKED QPYLLAPCDL QAIKACGVTF AVSLLERVIE
EQAGGDPAKA EEVRAAITRL IGTDLSKIKP GSEAAVKLKE ELQRRGAWSQ YMEVGIGPDA
EVFSKAQPMS SVGLGADIGL LPASKWNNPE PEIVLAVNSK GEVVGATLGN DVNLRDIEGR
SALLLGKCKD NNGSCAIGPF IRLFDGRFTL DTIRATSVSL RVEGTDDGFV LEGVSHMQEI
SRDPIDLVSQ TWGKHHQYPD GFMLFLGTMF SPIKDRDAPG GGFTHHLGDR VTISAPPLGA
LVNTVRLSTE IAPWTFGVRA LYANLAERSL LNLG