| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5647 |
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| Symbol | |
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| ID | 6279135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1850451 |
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| End bp | 1851365 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616721 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001889364 |
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| Protein GI | 187920333 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.373454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.924081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG GCTTTATCGG ACTCGGCAAC ATGGGCGCGC CAATGGCGCA CAACCTGCTC
AAGGCGGGTC ATGCGGTCAA CGTATTCGAC CTCAACGCAC AGGCCGTGCA GGCGCTCGTG
GATGCGGGCG CGAAAGCGGC CGCATCGCCG AAAGCCGCGG TAACCGACGC GGAATGCGTG
ATCACCATGT TGCCCGCCGC CGCGCATGTG CGCAGCGTGC TGAGCGCGGA CGACGGCGTT
TTCGCCGGCA TCGCGAAGGG CGTGACGATC ATCGATTCGA GCACGATCGA CCCCGCGAGC
GTGAAGGCGT TCGCCGAACT CGCGCAGCAG CACGGCAACA CCTTCGTCGA TGCGCCGGTT
TCAGGCGGCA CCGGCGGCGC GGCGGCCGGC ACGCTGACCT TCATGGTTGG CGGCAGCGCG
AGCGCGTATG AGCAGGTCAA GCCGGTGCTT GCGGCGATGG GCAAGAACAT CGTGCATTGC
GGCGACACCG GCACGGGCCA GGTCGCGAAG ATCTGCAACA ACCTCGTGCT CGGCATCACG
ATGGCGGGCG TCGCCGAAGC CATGTCGCTC GGCGAGGCGC TCGGCATCGA CGCGAAAGTG
CTGGGCGGCA TCATCAATAC ATCGACGGGG CGCTGCTGGA GTTCGGACAC CTACAATCCG
ATGCCCGGCG TGATCGAGAC CGCGCCGTCC ACGCGCGGTT ACACGGGCGG CTTCGGCACG
GATCTCATGC TCAAGGATCT CGGTCTCGCC ACCGACGCCG CGAAGACCGC GCGTCAGCCG
GTTTATCTCG GCGCATTGGC GCAACAGCTT TATCAAACGA TGAGCGCGAA AGGCGCGGGA
CGTCTCGACT TTTCCGCGGT CATCAAGCTG TATCGTCAGG ACGGCCAGGA CGGCAAGGAC
GGAGGCGCGG CATGA
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| Protein sequence | MKIGFIGLGN MGAPMAHNLL KAGHAVNVFD LNAQAVQALV DAGAKAAASP KAAVTDAECV
ITMLPAAAHV RSVLSADDGV FAGIAKGVTI IDSSTIDPAS VKAFAELAQQ HGNTFVDAPV
SGGTGGAAAG TLTFMVGGSA SAYEQVKPVL AAMGKNIVHC GDTGTGQVAK ICNNLVLGIT
MAGVAEAMSL GEALGIDAKV LGGIINTSTG RCWSSDTYNP MPGVIETAPS TRGYTGGFGT
DLMLKDLGLA TDAAKTARQP VYLGALAQQL YQTMSAKGAG RLDFSAVIKL YRQDGQDGKD
GGAA
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