Gene Bphyt_5522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5522 
Symbol 
ID6277811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1727116 
End bp1728417 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content64% 
IMG OID642616604 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001889247 
Protein GI187920216 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.360968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTGG CGAAACCGCT TCGTTCACTC TATGTGCAGG TCCTGCTGGG CGTGGTGCTC 
GGCATCGCGC TCGGTCATTT CCTGCCTGAA GTCGGTGCGC GTCTCAGACC TTTCAGCGAC
GCGTTCGTCG GTCTGGTGAA GATGATGATT GCGCCGATCG TTTTCTGCAC TATCGTCTCG
GGGATCACGT CGCTCGCGAG CGGGAAGGCG ATCGCGCGCA CGATCTTTCA GGCGCTGGGG
CTCTTCTATT TGCTGACCGC CGTGGCGCTC GCACTTGGCC TCGTCACCGC TTTCGTGCTC
CAGCCCGGCG CGGGTATGCA CATCGACGCG CAGCATCTCG ACACAAGTAT CCTCGCGCAA
TATGGCAAGC ACGCGCAGCC TCGCGGCCTG GTCGCATTCG CGCTGAATGT CATCCCTGAG
ACGATGCTTG GCGCCCTCGA CAAGGGCGAG GTGTTGCCGG TGTTGCTTCT CTCGCTGCTC
TTCGGTTTTT CGCTCAATGC CTATCCGAAG GCGGGCAGGC CGGTGCTCGC TCTCATCGAC
GGCATCGCGC AGACCCTCTT TCGCATCCTC GCGATGATCA TGCGACTGGC GCCGCTCGGC
GCATTCGGCG CGATGGCGTT CACGGTGGGC CGCTTCGGCA TCCGTTCGGT CGGCTCACTC
GGCATGCTGA TGGTGTCCTT CTACGTGGCG TGCCTGCTGT TCGTTGCACT GGTGCTCGCC
CCGCTTGCGC GGCTCCACGG GTTCGCGCTT TGGCGGCTGC TGCGCTATCT GCGCGAGGAG
TTGCTGATCG TTCTCGCGAC GTCGTCGACG GAGCCGGTGC TGCCGCGCCT GATCGCGAAG
CTGGAGGCGC TCGGCTGCGA CAAGGGGGTG GTGGGACTTG TGCTGCCCGC CGGCTATTCG
TTCAATCTCG ACGGCACCGC GATCTATTTG ACACTCGCCT CGGTGTTCAT AGCGCAGGCG
TGCGACGTGC CGCTTACCGC GCCGCAAATC GCGATAATGC TCGCGGTTAT GCTGCTTACC
TCAAAAGGGG CGGCCGGCGT GTCGGGTAGC GGACTCGTGG CGCTGGTCGC GACGCTGACA
GTGATTCCCG ATTTGCCCGT AGCGGGAGTG GCGCTACTGG TCGGCATCGA CCGTTTCATG
TCCGAGGCGC GCGCCCTGAC GAGCGTGATC AGCAACGCCT GCGCAGTGAT CTTCGTTTCG
ATGTGGGAAG GGGCTTGCGA TCGTACGCGT CTCGCGCAGA TGCTCGGGGC GATGGCGCCG
GGCGGCGCGG ACCGCTCCGC GAGGAATACG CCGGGCACCT GA
 
Protein sequence
MRVAKPLRSL YVQVLLGVVL GIALGHFLPE VGARLRPFSD AFVGLVKMMI APIVFCTIVS 
GITSLASGKA IARTIFQALG LFYLLTAVAL ALGLVTAFVL QPGAGMHIDA QHLDTSILAQ
YGKHAQPRGL VAFALNVIPE TMLGALDKGE VLPVLLLSLL FGFSLNAYPK AGRPVLALID
GIAQTLFRIL AMIMRLAPLG AFGAMAFTVG RFGIRSVGSL GMLMVSFYVA CLLFVALVLA
PLARLHGFAL WRLLRYLREE LLIVLATSST EPVLPRLIAK LEALGCDKGV VGLVLPAGYS
FNLDGTAIYL TLASVFIAQA CDVPLTAPQI AIMLAVMLLT SKGAAGVSGS GLVALVATLT
VIPDLPVAGV ALLVGIDRFM SEARALTSVI SNACAVIFVS MWEGACDRTR LAQMLGAMAP
GGADRSARNT PGT