Gene Bphyt_5497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5497 
Symbol 
ID6280083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1701021 
End bp1701809 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content58% 
IMG OID642616580 
Productprotein of unknown function UPF0153 
Protein accessionYP_001889223 
Protein GI187920192 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.30539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGATA TCAACTTTGC CTGTACGACA TGTGGCCAGT GCTGCCATGA TTTGCGCCTG 
CCGCTGACAA TCGCCGAAGC GATCGATTGG CTAAAACGTG GAGGACAGGT TGAACTTCTC
TGCGAAGCTA TTCCATGGCC GGTCGAGCCG GAGCCCGACA ATGCGCAGGC TGCGTACAAA
CGGGTGCGTT CGTCACCCGT CATGAGCGGA ACGTTACCGG TGCGCGTCTC GATCATTCTG
ACTGCGGCGT TCGCCGGAGC GTGTCCCAAT CTGCGCGCCG ACATGCTGTG CGGTATTTAC
GATGAACGCC CGCTGGTGTG CAGAATCTAC CCGGCGGAAA TCAATCCGTT CGTACCATTG
GTGCCGCAAA ACAAGGCCTG TCCGCCGCAA GCATGGCAAA CCATACCGCT ACAACGGCAA
GGCGTCCTTG TCGATGCGAC GACCGATCAA CTCATCCGGC AGTCGCGTCT CGCCGCTCAG
TCAGAAGCGC CGTTACGGAT GCGGATTTGC CGTGAGCTCG GACTGGATCA TGCCGCGCTC
GCGAACGAGG GCTTCGTCAT TCATACACCG GACCGCGAAG CGCTGCTAGC TGCCCTCGCG
CAGTGTTGCG TGTCACCGCT TCCGGATGAC GAATCGACTC AATGGACGTT TGTGTCCAAT
CGTTCCATGA CGATGGAGAC GCTTGCGTCT GTCGGAGCGC TTGCTGATCC CGACGAACCC
ACCGCAGATA AAGCCTTCAG ATATCACGGT TTTTTTCCAT CGTCATGGGG CAATGGTCAG
GCCTCATAG
 
Protein sequence
MDDINFACTT CGQCCHDLRL PLTIAEAIDW LKRGGQVELL CEAIPWPVEP EPDNAQAAYK 
RVRSSPVMSG TLPVRVSIIL TAAFAGACPN LRADMLCGIY DERPLVCRIY PAEINPFVPL
VPQNKACPPQ AWQTIPLQRQ GVLVDATTDQ LIRQSRLAAQ SEAPLRMRIC RELGLDHAAL
ANEGFVIHTP DREALLAALA QCCVSPLPDD ESTQWTFVSN RSMTMETLAS VGALADPDEP
TADKAFRYHG FFPSSWGNGQ AS