Gene Bphyt_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5467 
Symbol 
ID6277895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1672160 
End bp1672714 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content63% 
IMG OID642616552 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_001889195 
Protein GI187920164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.309116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GTTTGCCTCA CTTCAACCCG TCCGCGGCCA CGCCCGAACA GAAAGCGGTG 
CTCGACGAAA TTCTGTCCGG CCCGCGCGGC AATCTGAACG GGCCGTTTCT CGGCTGGATT
CATAGTCCCG AACTGGCGCA GCAGGCGCAA CGTCTGGGCG CGTTCTGCCG TTACCGGACG
GGTTTGCCGC TGCGCCTGTC GGAGCTGGCG ATTCTGGTGA CCGCGGCGCG CTGGCAGGCG
CAGGCGGAGT GGTACATCCA CTATCCGATC GCGTTGCAAG CCGGCGTGTC CGAAGCGGAT
GCCCAGACGA TTCGTGAGGG AAAGCGCCCG GATTTCGCGG ACGCCGACGA CGCGCTGATC
CACGACTTCG CGAGCGAGTT GTACGACACC AAACGCGTTT CGGACGCGAT CTATGCGAAG
GCGGTCGAAC GCTTCGGACA TCAGGTGGTC ATCAACCTGG TGGGTCTGCT CGGCTATTAC
GCGTTGGTCG CCATGACACT GAACGTATTC GGCATGCGCG CGCTAGGGCA GGAGAGCTTG
CCGTTCGCTG AATAG
 
Protein sequence
MTERLPHFNP SAATPEQKAV LDEILSGPRG NLNGPFLGWI HSPELAQQAQ RLGAFCRYRT 
GLPLRLSELA ILVTAARWQA QAEWYIHYPI ALQAGVSEAD AQTIREGKRP DFADADDALI
HDFASELYDT KRVSDAIYAK AVERFGHQVV INLVGLLGYY ALVAMTLNVF GMRALGQESL
PFAE