Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5467 |
Symbol | |
ID | 6277895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1672160 |
End bp | 1672714 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616552 |
Product | Carboxymuconolactone decarboxylase |
Protein accession | YP_001889195 |
Protein GI | 187920164 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.309116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC GTTTGCCTCA CTTCAACCCG TCCGCGGCCA CGCCCGAACA GAAAGCGGTG CTCGACGAAA TTCTGTCCGG CCCGCGCGGC AATCTGAACG GGCCGTTTCT CGGCTGGATT CATAGTCCCG AACTGGCGCA GCAGGCGCAA CGTCTGGGCG CGTTCTGCCG TTACCGGACG GGTTTGCCGC TGCGCCTGTC GGAGCTGGCG ATTCTGGTGA CCGCGGCGCG CTGGCAGGCG CAGGCGGAGT GGTACATCCA CTATCCGATC GCGTTGCAAG CCGGCGTGTC CGAAGCGGAT GCCCAGACGA TTCGTGAGGG AAAGCGCCCG GATTTCGCGG ACGCCGACGA CGCGCTGATC CACGACTTCG CGAGCGAGTT GTACGACACC AAACGCGTTT CGGACGCGAT CTATGCGAAG GCGGTCGAAC GCTTCGGACA TCAGGTGGTC ATCAACCTGG TGGGTCTGCT CGGCTATTAC GCGTTGGTCG CCATGACACT GAACGTATTC GGCATGCGCG CGCTAGGGCA GGAGAGCTTG CCGTTCGCTG AATAG
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Protein sequence | MTERLPHFNP SAATPEQKAV LDEILSGPRG NLNGPFLGWI HSPELAQQAQ RLGAFCRYRT GLPLRLSELA ILVTAARWQA QAEWYIHYPI ALQAGVSEAD AQTIREGKRP DFADADDALI HDFASELYDT KRVSDAIYAK AVERFGHQVV INLVGLLGYY ALVAMTLNVF GMRALGQESL PFAE
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