| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5430 |
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| Symbol | |
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| ID | 6278022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1630489 |
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| End bp | 1631808 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642616515 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_001889158 |
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| Protein GI | 187920127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.875392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTAC TCGACATCTA CTGCAACACC ACCTTGGTCG GGACGCTGAC GGAAGAGGCG
CACAGTGGCG TCTTCACCTA TCTGCCTGGT ACGCCCACGG GCGACGTCGT CTCGCTTCTC
ATGCCGGTCC GAAACGCGTC GTACACCTGG CCCGGGGGCA TCATGCCTTC GTTTCAGATG
AATCTGCCGG AAGGCTTCAA GAAGGACCTC ATTCGCCAAC ATCTCGGCCC TCACGCGGAC
GTGAGCGATA TGGGGCTTCT CGCGTTGACA GGATCGAACA CCATCGGGCG GGTAAGAGCC
ATCCCGCACG GGGCGCCGCT CGCTACTGCG AGGTCCAGGT TCGATATGGC GACGCTCCTC
GCGAGCCCGA ACTCCAGAGA TAACCTGCTC AAACACCTTG AAGCAGGCAT CAGCGAAGGT
GTTTCGGGGG TCATGCCCAA AACACTCGCT TCCGGTGAGG AGAAGGCGAC CGTCTGGACG
GAGGAGTACA TCCTGAAGAC TGGCCCGGTC GACCTGCCGG GGCTCAGCAT TAACGAATAC
CTCTGCCTCG AGGTCGCAAG AAACACGGAC CTGAATGTTC CGGAAACACA CCTTTCAGAG
GACGGCCGCG TGCTCGCGAT CCGGCGTTTC GATCTGCAAG CGGATGGCGC GCGCGTTGGG
GTCGAAGATT TCTGCGCGTT GAAGGGCTTT GATCCTGTAC GCAAATACCA GGGCACCGTC
GAAGACCTTG CGAAACTCTG TAATCAGTAT CTCGGGGTGG ATCACCGCAA AGACAGCAAG
CGCAAGCTGT TCCTGCTGTT GCTGCTGAAC TATTCGCTGC GTAACGCCGA CGCGCACATG
AAGAACTACG CGCTGACGTA CACGAAAGAG CGGGACGCTC GCCTTTCGCC GGTGTACGAC
ATCGTGACTG TCACCGCTTA CCCTCGCTAT CAGGATGACG CACCGGCGTT GTCGCTGAAG
GGCAAAAAAC TGTGGTGTTG CGGTAAGGCG CTGTTCGAAT ACGGCGGTGC GCGATTGAGT
CTCTCGCCAA CGGATATGAA CGCAGCACTT GAACAGGTGG TGAGCGCGGT GCAGAAAGTG
CTTCCGCTGG TCAGCGCGTA CACGGACCGT TATCCCGAGT TCAGGAATGT CGGCAAGCGA
ATGCTGGAGG CGTGGGCGCG AGGTCTCGAG GACATCAAGC CGGATGCGAA GCCTGGAAAG
GGCGTGCCCG CGCCTTTGCG GGAACAGGCG GGATTGTCCG AAACGCATTC GGACGTGAGG
CGAAAAACCG ATAACCCCTA TATCGACCCG AACGGACCGT TCGGTCATAA GTCTCGATAG
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| Protein sequence | MAVLDIYCNT TLVGTLTEEA HSGVFTYLPG TPTGDVVSLL MPVRNASYTW PGGIMPSFQM
NLPEGFKKDL IRQHLGPHAD VSDMGLLALT GSNTIGRVRA IPHGAPLATA RSRFDMATLL
ASPNSRDNLL KHLEAGISEG VSGVMPKTLA SGEEKATVWT EEYILKTGPV DLPGLSINEY
LCLEVARNTD LNVPETHLSE DGRVLAIRRF DLQADGARVG VEDFCALKGF DPVRKYQGTV
EDLAKLCNQY LGVDHRKDSK RKLFLLLLLN YSLRNADAHM KNYALTYTKE RDARLSPVYD
IVTVTAYPRY QDDAPALSLK GKKLWCCGKA LFEYGGARLS LSPTDMNAAL EQVVSAVQKV
LPLVSAYTDR YPEFRNVGKR MLEAWARGLE DIKPDAKPGK GVPAPLREQA GLSETHSDVR
RKTDNPYIDP NGPFGHKSR
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