| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5350 |
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| Symbol | |
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| ID | 6277569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1532993 |
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| End bp | 1534666 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616436 |
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| Product | Alpha,alpha-trehalase |
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| Protein accession | YP_001889079 |
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| Protein GI | 187920048 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.552209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGT CATCGCAACC GCGCAACTTC GGCCGCGCCG GCATCGCATC CCGCACCGCT
TTCCGTAGCG TCGAATCCAC CAGGCTGCAT CGCATAGCGG CCGCTTCAAG CTTCGTCTTC
CTGATCAATC TCGCCGGCGT CTGCCATGCC GACACCCAGG TCGGCGGGCC ACTTCCGCCC
GCGCCCGACA AACTCTACGG CGATCTCTTC GTCGCCGTGC AAACCGCGCA GATTTATCCG
GACCAGAAGA CCTTCGTCGA CGCAACGCCG AATGCCGATC CCGCCGCGAT CGTGCAACTG
TACGAGCAGC AGAAGCACAA CCCCGGCTTT TCGCTGGCGA AGTTCGTCAA CAAATACTTC
ACGCCACCGA GCGAGCCGGT CATCACGCCA CCCGCCAATC AGACGCTGCG TGAACACATC
AACTGGCTAT GGCCCGCGCT GACCCGCACC ACCACCAGCG CGCCGCCGAA CAGCTCGCTG
ATTCCATTGC CGAAACCCTA TGTGGTGCCC GGCGGCCGGT TCCGCGAAGG CTACTACTGG
GACACCTATT TCACGATGCT GGGTCTGCAG GAATCGGGCA ACGAAAATCT GGTCGACGAC
ATGCTCGACA ACTTCGCCTA CGAGATCGAT ACCTTCGGCC ACATTCCAAA CGGCAATCGC
ACCTACTATC TGGACCGTTC GCAGCCGCCG TTTTTCTCGC ACATGGTGGA ACTCGCGGCA
AAGATGGAAG GCCACGGCGT CTATCAGAAG TACCTGCCGG CGTTACGCAA GGAATACGCG
TACTGGATGC AGGGCGAGTC CACCACGCGA CCCGGCTCGG CCACGCGCAA TGTCGTCGTG
ATGCCGGATC GCACGGTGCT CAACCGCTAC TGGGATGAGC TCGACACGCC GCGCGACGAA
TCGTACCTGG AGGACATTCA GACCGCGCAA CAGGCGAGCG GCCGCAATCC GAACGACGTC
TACCGCGAGT TGCGCGCCAC CGCCGAAAGC GGCTGGGATT TCAGCTCGCG CTGGTTCGGC
GACAACATGA CGCTCGCGAC GGTGCGCACC ACGTCGATTA TTCCGGTCGA CCTGAACAGC
CTGATGTTCC ATCTCGAGAT CACCATCGCC AAGGGTTGCG GCGAGACGCG CGATTTCCGC
TGCGTCGGCG AATTCGCGCA ACGCGCCGCG AAGCGTGCGC TCGGCATCAA CCGCTATCTG
TGGAATCCCA ACGGCTATTA CGGCGACTAT GACTGGCAGC TCGCCAGGCC GCGCGACAAC
AAGACGGCGG CGATGGTGTT CCCGCTGTTC GTCGGCGCCG CGTGGCCGGA TCGCGCGCTC
AAGACGGCGA AACAGGTGCA GTCCACCTTG CTGCAACCGG GCGGCCTCGT CACGACGACC
TACAACACCA CGCAGCAGTG GGACGCGCCG AACGGCTGGG CGCCGCTGCA CTGGGCGGCC
ATTCAGGGCT TGAAGCGTTA TGGTCAGGAC GCGCTCGCGC AACAGATCGG CACGCGCTTT
CTCAGCGACG TCAAAGGCGT CTATGCGTCC GATCAGAAGC TGGTCGAGAA ATACGTGGTG
GAAGGCTCGG GAACGGGCGG CGGCGGCGGT GGCGAATATC CGCTGCAGGA CGGCTTCGGC
TGGACCAACG GCGTGACGCT CAAGTTGCTC GACCTGTACA GCCCGGGCGA TTGA
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| Protein sequence | MIESSQPRNF GRAGIASRTA FRSVESTRLH RIAAASSFVF LINLAGVCHA DTQVGGPLPP
APDKLYGDLF VAVQTAQIYP DQKTFVDATP NADPAAIVQL YEQQKHNPGF SLAKFVNKYF
TPPSEPVITP PANQTLREHI NWLWPALTRT TTSAPPNSSL IPLPKPYVVP GGRFREGYYW
DTYFTMLGLQ ESGNENLVDD MLDNFAYEID TFGHIPNGNR TYYLDRSQPP FFSHMVELAA
KMEGHGVYQK YLPALRKEYA YWMQGESTTR PGSATRNVVV MPDRTVLNRY WDELDTPRDE
SYLEDIQTAQ QASGRNPNDV YRELRATAES GWDFSSRWFG DNMTLATVRT TSIIPVDLNS
LMFHLEITIA KGCGETRDFR CVGEFAQRAA KRALGINRYL WNPNGYYGDY DWQLARPRDN
KTAAMVFPLF VGAAWPDRAL KTAKQVQSTL LQPGGLVTTT YNTTQQWDAP NGWAPLHWAA
IQGLKRYGQD ALAQQIGTRF LSDVKGVYAS DQKLVEKYVV EGSGTGGGGG GEYPLQDGFG
WTNGVTLKLL DLYSPGD
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