Gene Bphyt_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5300 
Symbol 
ID6278770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1483570 
End bp1484115 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID642616386 
Producthypothetical protein 
Protein accessionYP_001889029 
Protein GI187919998 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACG ATTCAAAGCA TGGATTCGAC GCCGCGAAAA CCGAGTACGA AGCCTTCATG 
CTCAAGCCGC ACGACTGGGT GCCGAATAAT CGCCACCTGC CTGTCGTGAT CTACCGGCGC
GCGCTCTTGC CGGAGAGCGG CGACCTCGCG GCCGCCTTCG AACTCCTTTT CGAAGGCAAT
GCATGGCCGC CGCAGTGGCG CGACGGCATT TTCGACTATC ACCATTTCCA CGCCACAGCG
CATGAAATAC TTGGCGTGAC GGATGGCTCC GCGCAGGTGA TCATCGGCGG TCCAGGCGGC
AGAGTGGTGA CGCTATCCGC CGGCGATGCG ATCCTGCTGC CGGCCGGCAC TGGCCACTGC
CTGCAATCGT TCGCGCGGCA TTTCCAGGTC GTCGCCGGCT ATCCGGAGGG CCAGCAGTGG
GACATCCGCC GCGAGGCGCT GACGCCGGAC GAACTCGCGG CCATGGAGGC ACTGCCTTTT
CCGCCGCTGG ATCCGATCGA CGGCAAGCAA GGTCCGCTGG TCGAGCATTG GCTGCGCGCG
GCTTGA
 
Protein sequence
MFNDSKHGFD AAKTEYEAFM LKPHDWVPNN RHLPVVIYRR ALLPESGDLA AAFELLFEGN 
AWPPQWRDGI FDYHHFHATA HEILGVTDGS AQVIIGGPGG RVVTLSAGDA ILLPAGTGHC
LQSFARHFQV VAGYPEGQQW DIRREALTPD ELAAMEALPF PPLDPIDGKQ GPLVEHWLRA
A