Gene Bphyt_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5275 
Symbol 
ID6278910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1453231 
End bp1453767 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID642616361 
ProductAnkyrin 
Protein accessionYP_001889004 
Protein GI187919973 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.667111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGACC ACGCTGATAC TTCCCCGTCC TCCGGCCAGC CGCTCGATCC GGAATTGCTC 
GAACTGGCGC ATCAGGTTTT CGACCTTGCG CGGCGCGGCG ATGCCGCCAT GCTTGCGGCA
GTGATCGAAA AAGGCGTGCC GCCGAATCTG CGCAACGACA AAGGCGACAG CCTCGTCATG
CTCGCCAGCT ACCACGGTCA CGCAGACGCC GTGCGCACGC TGCTCGAACA CGGCGCCGAT
CCGAATCTGC GTAACGACAA CGGACAGACG CCGATTGCGG GCGCGGCCTT CAAGGGCTTC
GACAAGGTGA TCGAAACCTT GCTCGCGCAT GGCGCGGATG TGGAAGGCGC GTCGCCGGAC
GGACGCACCG CGTTGATGAT TGCGGCGATG TTCAATCGCA CGGCGATCAT GGAGTTGCTG
ATCGCGCGTG GCGCGGACCC GAAGGCTCGC GACGCCAACG GCGTGACGGC AATGGATGCG
GCCGGCCGCA TGGGCGCCGG CGATGCGCAA GCGCGCCTGA AGGAACTCGG TTCATAA
 
Protein sequence
MTDHADTSPS SGQPLDPELL ELAHQVFDLA RRGDAAMLAA VIEKGVPPNL RNDKGDSLVM 
LASYHGHADA VRTLLEHGAD PNLRNDNGQT PIAGAAFKGF DKVIETLLAH GADVEGASPD
GRTALMIAAM FNRTAIMELL IARGADPKAR DANGVTAMDA AGRMGAGDAQ ARLKELGS