| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5209 |
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| Symbol | |
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| ID | 6279078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1387014 |
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| End bp | 1387754 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616295 |
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| Product | putative type III secretion transmembrane protein, EscU/SctU/YscU-like protein |
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| Protein accession | YP_001888938 |
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| Protein GI | 187919907 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.266949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AGACAGAAGC CCCCACACCC AACCGGCTGC GGCGTGCCCG CAAGGACGGC
GACATTGCGA AGAGCACGCA CGTGAGCGTC GCCGTCAGCG GGCTCTTCTG GTTGCTGTTT
CTGCTGATGG ACGCACCACA CGTCTATCAG GTCTGCGTGC ACGTGGTGGA AGTTGCCACG
CAGATCGATC AGGGCCAACC GTTCGCCGTG CGTTACCTGC AGATCACCAG GGCGTTCGGC
GCGGCGATGC CGATACTGCT GGCGACGCTC GGCGTCGGTG CACTTGCGGT AGTCGTGCCG
GAGGTCGCAC AAGCGGGCGG CGTATTCGCG GTCAAGCGTG CGTTGCCGGA CTTCAAGCGT
TTGAATCCGG TGACAGGATT GAAGAACCTG TTCGGTCTGA AAACGCTGAT CGATACCGGC
ATCGTGCTAA TGCAGTTCTG CATTCTGGTG TTCGTTCTTT GGCATGCGTT CGCGACATGG
TGCGCACAAC TGTTGCCGGC GTTCGCGCTC GCGTTCGGCG GACAGTTGAG TGTCACTGCC
CAGTCGCTCG CGCAACTGCA AGGCCTGATG GCGGCGTCGC AACTGGCTCC TGCGGCCATC
GATTTCTGGC TGCAACGGCT CCAGTGGCGC CGGCGGCTGC GCATGGACAA GAACGAAATC
AAGCGCGAAC ACCGGGACGA GGATGGCGAT CCACATGTCA AGGGTCGTCG CCGTGCCTTG
CACAGGGAGC TGAGCCGATA A
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| Protein sequence | MSDKTEAPTP NRLRRARKDG DIAKSTHVSV AVSGLFWLLF LLMDAPHVYQ VCVHVVEVAT
QIDQGQPFAV RYLQITRAFG AAMPILLATL GVGALAVVVP EVAQAGGVFA VKRALPDFKR
LNPVTGLKNL FGLKTLIDTG IVLMQFCILV FVLWHAFATW CAQLLPAFAL AFGGQLSVTA
QSLAQLQGLM AASQLAPAAI DFWLQRLQWR RRLRMDKNEI KREHRDEDGD PHVKGRRRAL
HRELSR
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