| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5204 |
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| Symbol | |
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| ID | 6277991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1376332 |
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| End bp | 1377819 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616290 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001888933 |
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| Protein GI | 187919902 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACC TGCCTCTTCC CCGGTCTTTG CCGCGCCGCG CGCTGGCGGC CACGCTGATC
GGCGCGCTGC TCAGCGCGTG CTCGACCCTG CCTGCGTATC AACGCCCAAG CGCCGACATT
CCGGCGCAGT ACGCGGGCGC CGTGCATACG GGCGCCGTGC AAGCGAGCGA CACACCAGGC
TGGGCGCAAG CCGCGCCGGC CGACTCGACG CCGCGCGGTC CCTGGTGGAC GATCTTCAAC
GATCCCGTGC TGAACGAACT GGAGGCGCGC ATCGACGTGT CGAACCAGAC CGTGCGCAAG
GCCGTCGCGC AGGTTCAGCA GGCACGCTCG ATGGTGGACT ATCAGCGCGC CGGCTTCTTC
CCGACCATCA CCGCCGGTGT CGCGCAGGAC CGCTACCGGA CCTCGCAGAA CGTGGAAGGG
AAATCGCTCG CGGGCAAGAC GGTGCCGGAC TATTCGGCGG GCGTGTCGGC GAGTTGGGAG
CCGGATCTGT TCGGGCGCGT GCGCGACAGC GTGACCGGCG CTCAGGCCGA CGCTCAGGCG
AGCGAGGCCG ACCTCGAAGG CGTGCGCCTG TCGATGAGCG CGGACCTCGC CGCCGACTAC
TTCTCGCTGC GCTCGCTCGA CACGCAGAAG AAGCTGCTCG ACGACAGCGT GAACGCCTAC
GCCGCCGCGT TGAAGCTGTT GCAGCAGCAG CTGAGCAACG GTGCGATCGA TGCCTCCGCC
GTCGCTCAGG CTACGACGCA ACTCGAAGCG ACGCGCACCC AGGACACCGA CATCGACGTG
ACGCGCGCGC AGCTGCAGCA CGCAATCGCG ACGCTGATCG GCGAACCGGC ATCGACCTTT
ACGCTTCCGC CGAACGGTAC GGCCGTGACG CCGCCGGCAA TTCCGATTGG TGTGCCGTCG
CAACTGCTGG AGCGGCGCCC CGATATCGCC GCCGCCGAAC GGCGCGTGGC TTCCGCGAAT
GCGCAGATCG GCGTGGCGCA TGCAGCGTTT TTTCCGGATC TCGTGTTGTC CGCGAGCGCG
GGTCTCGAAA GCACGTTTTT CGCGCCATGG CTGAGCGCGC CGAGTCTGTT CTGGTCGCTC
GGTCCGCAAC TGGCCGGCAC GCTGTTCGAC GGCGGCAAGC GCAAAGCGAC CCTGCACGGC
GCCACCGCGC AATACGACGG CGCCGTCGCG GATTATCGAC AGTCGGTGCT GGTGGCGTTC
CAGCAGGTCG AGGACAACCT GTCCGCCCTG CACTCCCTCG CCGACGAAGC CGCCAGCCAG
CAGCGCGCCA CCACGGCCGC GGACCTGTCG TTGCGGCTCA CGACGAATCG CTTCAACGCA
GGCGCGGTCA GCTATCTCGA CGTGGTGACC GCGCAGACGA TTGCGCTGAC GAACCAGCGT
ATCGCGGATC AGATCGCCGC GCGGCAATTG GAGTCGAGTG TGTTGTTGCT GAAGGCGTTG
GGTGGGACTT GGGGTGCGGA AGGCGAGGGA GCGGCGGGAG CTATTTAA
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| Protein sequence | MINLPLPRSL PRRALAATLI GALLSACSTL PAYQRPSADI PAQYAGAVHT GAVQASDTPG
WAQAAPADST PRGPWWTIFN DPVLNELEAR IDVSNQTVRK AVAQVQQARS MVDYQRAGFF
PTITAGVAQD RYRTSQNVEG KSLAGKTVPD YSAGVSASWE PDLFGRVRDS VTGAQADAQA
SEADLEGVRL SMSADLAADY FSLRSLDTQK KLLDDSVNAY AAALKLLQQQ LSNGAIDASA
VAQATTQLEA TRTQDTDIDV TRAQLQHAIA TLIGEPASTF TLPPNGTAVT PPAIPIGVPS
QLLERRPDIA AAERRVASAN AQIGVAHAAF FPDLVLSASA GLESTFFAPW LSAPSLFWSL
GPQLAGTLFD GGKRKATLHG ATAQYDGAVA DYRQSVLVAF QQVEDNLSAL HSLADEAASQ
QRATTAADLS LRLTTNRFNA GAVSYLDVVT AQTIALTNQR IADQIAARQL ESSVLLLKAL
GGTWGAEGEG AAGAI
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