| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5141 |
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| Symbol | |
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| ID | 6278140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1306880 |
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| End bp | 1307560 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616229 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001888872 |
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| Protein GI | 187919841 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.301686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTGC AGAAACGTCT CGATGCCTTC AAGGCGACAT TCGAGTCCGG GCTACCTCCT
TACAATGTGC ACCGTTCTGC CGTCGATACG CTCCAGCGGG CGACCGACGA ACTGATCGAA
TCCGGTCTTG CTGAGCGAGC AAAAAAGGTC GGCGACGTTG CGCCGTGTTT TATCCTGAAG
GATCCAGACC ACTGGCCGAT CGGTTCGCGC AAGCTGATTG CCGACGGTCC GCTGGTACTG
ACGTTCTATC GCGGCGTGTG GAGCCCATAC TGCAATCTGG ACCTTCAGGC GCTGCAGGCG
GCACTGCCCG ACATCGTCGC CCGTGGAGCG AGCCTGATGG CAATTTCGCC GCAGAACGCG
GTCAATAGCC GCAGGACGAT CCATGAGAAC CGCCTCAGTT TCCCGATACT CGGCGACCCA
CGCGGTGAAC TTTCGGCAGC CTACGGACTG CGCGTCGCGT TGCCGGACTA TCTTGTCGAA
CTGTACCTGA CCACATTCGG GACCGACCTG TCGTCATTTA ACGACGACCC CTCGTGGACG
CTGCCGATGC CGGCGAGGTT CGTCATCGAC CAGGACGGCA TCATCGCTTA CGCCGAGGTG
AGTCCGGACT TCACGAAACG TCCCGACCCC GCCGAGCTGC TTCCGGTTCT TGATGGACTT
GTCGCCGGAG GCCGGGCATG A
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| Protein sequence | MSLQKRLDAF KATFESGLPP YNVHRSAVDT LQRATDELIE SGLAERAKKV GDVAPCFILK
DPDHWPIGSR KLIADGPLVL TFYRGVWSPY CNLDLQALQA ALPDIVARGA SLMAISPQNA
VNSRRTIHEN RLSFPILGDP RGELSAAYGL RVALPDYLVE LYLTTFGTDL SSFNDDPSWT
LPMPARFVID QDGIIAYAEV SPDFTKRPDP AELLPVLDGL VAGGRA
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